Search result

BaseInfo

ncRNA ID osa_circ_039805
Species Oryza sativa
Class circRNA
Genome position 9:19961902-19962825[+]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/NA
Type exonic
Splice junction sequence ACCAGAAGAAAAATGCAAAACCAGAGGGGTCTTCTGGCTCGCAAAGGGGAGCTCCCCCGGCACCTGATGCAGGCCTTCCCAATCCTTTTGATTTTTCTCATACTTCCACTACATTGTCTGGACCTGAAGAAACTGAAGAGGATGGTGGAGATGATGATGAGTCCATTGTCCATCATACTGCCAGTGTTGGCGATGCGGAG
Tissues leaf/root
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence ACCAGAAGAAAAATGCAAAACCAGAGGGGTCTTCTGGCTCGCAAAGGGGAGCTCCCCCGGCACCTGATGCAGGCCTTCCCAATCCTTTTGATTTTTCTCAGTTTAGCAACTTGCTCAATGTAAGTTCTTTTTTTTTTCGCGCAGCTAAAAGCATGATATGTGCTCTCTTTTTGTGCATCACTTATGTTTAACTGTACTATTCTTACGTACACAACTGTAATGTGATGTGCAGGATCCATCTATAAAGGAGATGGCAGAGCAGATTGCAAGCGACCCTGTGTTCACCCAGATGGCAGAGCAGCTGCAGAAGAGTGCTCATGTGACCGGGGAACAGGGTGGCCCTGCATTGGATCCTCAGCAGTACATGGAAACAATGACACAAGTCATGCAAAACCCTCAATTCATGTCAATGGCAGAACGTCTTGGGAATACTCTTATGCAGGTATCATGTTATGTTTCCAGAGTCATCACCAGAAAAAATTTTCAGAATGTTTCTTCGCTTCAAGTTTTCTGCTACGCATGACAGGATCCTGGAATGTCCAGTATGCTCGAGAGTTTGACTAGTCCTTCTCATAAGGAGCTGCTTGAAGAGCGGATGTCCCGTATTAAAGAAGATCCCTCTTTGAAGGGGATTCTTGATGAGATAGAGAGTGGTGGTCCATCTGCTATGGTGAAGTAGGTGTTGTATGCTAGTATTTAGATATAACTGTGGCTTTTAAATTTGCTGAGATGGTTTGCCTCACTTATTTCAGGTACTGGAATGACCCTGAAGTTCTTCAAAAGATTGGTCAGGCTATGTCAATTAATTTTCCAGGAGATGCTGCTACTTCCACTACATTGTCTGGACCTGAAGAAACTGAAGAGGATGGTGGAGATGATGATGAGTCCATTGTCCATCATACTGCCAGTGTTGGCGATGCGGAG