ncRNA ID | novel_gma_miR1263 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:24723539-24723660 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451641 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GGAGUAGAAAACAAUCUUGGAU - 22 |
Stem-loop(if miRNA) |
--                       A   -      -U  ------      -----AU           GGAGUAGAAAACAAUCUUGGAUU CCA GGAAAC  UC      AUAGGC       AGUAUAUGU   ||||||||||||||||||||||| ||| ||||||  ||      ||||||       ||||||||A   CCUCAUCUUUUGUUAGGACCUAA GGU CCUUUG  AG      UAUUUG       UCAUAUACA UU                       C   A      UU  AACCUA      AAAUACU         |
Stem-loop sequence | GGAGUAGAAAACAAUCUUGGAUUACCAGGAAACUUCAUAGGCAUAGUAUAUGUAACAUAUACUUCAUAAAGUUUAUAUCCAAGAUUGUUUCCAUGGCAAUCCAGGAUUGUUUUCUACUCCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520222.3 |
|
2.0 | PREDICTED: Glycine max V-type proton ATPase 16 kDa proteolipid subunit (LOC100798638), mRNA | V-type proton ATPase 16 kDa proteolipid subunit(LOC100798638) | coding protein | psRNATarget |