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BaseInfo

ncRNA ID novel_gma_miR1263
Species Glycine max
Class miRNA
Genome position Chr9:24723539-24723660 [+]
Reference genome Glycine_max_v2.0
Source SRR1451641
Length 22
Mature sequence(if miRNA) 1 - GGAGUAGAAAACAAUCUUGGAU - 22
Stem-loop(if miRNA) --                       A   -      -U  ------      -----AU        
  GGAGUAGAAAACAAUCUUGGAUU CCA GGAAAC  UC      AUAGGC       AGUAUAUGU
  ||||||||||||||||||||||| ||| ||||||  ||      ||||||       ||||||||A
  CCUCAUCUUUUGUUAGGACCUAA GGU CCUUUG  AG      UAUUUG       UCAUAUACA
UU                       C   A      UU  AACCUA      AAAUACU        
Stem-loop sequence GGAGUAGAAAACAAUCUUGGAUUACCAGGAAACUUCAUAGGCAUAGUAUAUGUAACAUAUACUUCAUAAAGUUUAUAUCCAAGAUUGUUUCCAUGGCAAUCCAGGAUUGUUUUCUACUCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520222.3
ncRNA:22   UAGGUUCUAACAAAAGAUGAGG   1
  *|=|||*||||||||||||||=
targets:879   UUUCAAUAUUGUUUUCUACUCU   900

2.0 PREDICTED: Glycine max V-type proton ATPase 16 kDa proteolipid subunit (LOC100798638), mRNA V-type proton ATPase 16 kDa proteolipid subunit(LOC100798638) coding protein psRNATarget