Search result

BaseInfo

ncRNA ID	osa_circ_039714
Species	Oryza sativa
Class	circRNA
Genome position	9:19414705-19420947[-/-]
Reference genome	RGAPv7
Source	PlantcircBase
Method	find_circ/NA
Type	exonic
Splice junction sequence	CTTCGACCGGTCGGAGCAGCGGCGAGGTGGCGGCGGCGGCGGCGGCGTGGAGGAGTTCGGGAGGAGAGAAGGTTTTCTTATATCCAGGAACCCTAGAATGGGATGCAAACCTTGAGGCCGATGTAGCGGTCGCTGTGCGGCCTCTTGAACTGCTTCACCCGCTTCTTCACGATCTTCTTCGTCAGCAACGGCACCGCCAT
Tissues	root/seed, pistil
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTTCGACCGGTCGGAGCAGCGGCGAGGTGGCGGCGGCGGCGGCGGCGTGGAGGAGTTCGGGAGGAGAGAAGGTTTTCTTATATCCAGGAACCCTAGAATGGTGGAGTCCATAGGCGCGCTGAGTTGTAATGGGCCGTCACGGCCGATAAGGCCCAACTAAGATTTTGAGTTCAGATTTCTGGCCCAGATTTTGCTGAGATTTGACATTGGGAAATGAGAATTCGAATTGAATTGATTTTCACCGAGATGAACGAGAGTGAGGTAGACTGAAGAAAATGCAAGCAAATCATAGCATTTTGTTTGCCTCCCTCTTCTGTGAACATCTTTATGCAATTTCTAATTGCAATTCTTGGTTATTTAAACGGATTTAGTTTGAGGGTCTGGGGGTAGAAATTTCACGGATTTAGTTTGCATATATGATCTGGGATTTCACCTCTGAAAGGCTACATTGCGGTGGCAGCTGATGCAAATCGAATCAGGTTTACGGATTTCCGTTTGTATTTGTTTGGGAAAAAGTTTGTTGATCTCCTTAATCATGTGGTACTATTCTTTACCAGAATTTGTTTGGGGAGTATAAGCTAAATTAACTCAAATTAAATCAAACTGATCAGGTTTTAGCCTGGATATGTCCACTTCGAACTTCATACAATTCGGATGCTATATCACACATAGAAGCCAAACCGGCACAGCAGTTATGTTTGTAACCATTTTCCAAACAAAACGAAGCGCAAAACAAGTCTACAATTTGGAACAAAAGATGCATCACAGATCATGCAATTGTTCAGAAAGGCTAAAAGTTAAATAGAAGCTTATGTTATAAAATAGCAGATAAGGTCATGGTGAAAAAAAAAGAGAGTTGATTTCTCTATGGGGTCCTGAATTTGAAATGCATTGCATTTCACTACTCACTATTTGATTCGACAACTAGACTTTGTTTTGGCGCGTAAGATGTGAACCATCCTGGCTATCTAAAGCTCGCTGTCATCATCGTCCTCATCGGATTTGCTGGCTGGCTCGCCATTGACAGCAACAAGCTCGGTATCGAAAATGAGAGTCGCTCCACCTGCAGGCCGGAACATAACAACACCAGATCAGATCAGATATATTACATATGTAGTGAAAAAGTCCCGACTAGAAAAAATATAGCATTGCAGCAGCTCCCTCAGACAATGTGGCCATGTGCTGTTGTATGATAAACTATTTTTATTATACACAACTTCTCTTGAAAAGGATGTACCATTCTAACTTGACAGCGGCATAAACTCAAGAGACAAGAACTACAAAACGACATACCAGGGATGGTCGGCGGTGACCCTTGAGCACCATAACCGAGCTTTGAAGGGATCTTCAGCTTCCTCTTCTCGCCAACGCACATGCCCAGAATGCCCTGATCCCACCCTACAAATGGAGTATTGAAATTTTTAGATAGACAATGGAGCATTGAAATTTTAAACAATACTAAAATTAAATGAGTAGCTAGCTATTGATTGGGACCATTACTATTACCTTTGATCACTTGGCCAGTGCCCAACTCAAATTCGATTGGGTCACCTCTTTCATAGCTAGAATCAAAATCTGTTCCATCAGTAAGTTTTCCCTGTAAATGGATGACAGAGGCCAAGTGAACTACAGGCTTCATAAATAAAGTGATGCCAGTAAATAAAAACAAAACAGGCCATACAGCAGAATATCAAACTTACACGGTAGTGAACTTTAACTCTGTCGCCTTTGTGAGCTTGAATGCTGCAGGATTCTGGCTTGTGCTGCAAGTGAAACAAGGTCACAACACAAATATATGACTATATGAGCCCAATAAAATAAATATATCAAAATGAAAGTAGCATATGATATTTAAACTATCTAAATTCTATATGGCACACAAATTTGAGATCCAGCTTCTTGAAAGAGCCATTTATTTTGTAAAAGGCTACCGTTTTCTCTAGAGCATCAAAATAAATAAAATGCATATTTTTGGACCAATGTGGTGACAATTACAATGTTCTTTCCTTGGCAAGGCTGTACTAATTCTGAAGATATGCTGCGTGGGGCAAGCTAGATTTTTGTTTTATTTTTTTTCCTATAAGAAATGGCAGCGTAACACCAATATTTCAGATTATCCTATGGTAGAGAATAAATTTATGTCCGAGGTCATATGTTCAAGACGCCCTGTCCCTTACAGGAAGGTACTATGTAATACTCCATTCATATCTAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCATCTTATTCAAAAGCTTTTGTGAAATATGTAAAACTATATGTATAGATATAGGTATATTTAACAATGAATCAAATGATAGGAAAAAATAATAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATATTTAAAAAAGTCAACGAACGTCAAATATTTAGAAACGAAGGGAGTATTAGTTTGTAGTTCCTCCTACGATTTGTTAAGTAGCTTTACTCGATGGCAAATGGGATATTAGAACTACGGAACCTAAAAGCCCTGAAGCAATTATTCACGCAGAGATTCATTTCTCCATGAACTAATTTTGATAGCAATTAAAATGTACAGGAAATACAGTAATAGAAGGCTAAACTTCCCGAAGGAAAACCTTGATCAAAACCCAAGGTAACACCTGCCCAATCAATTCCACAAAAGAGCCTCAATTTTCCGCTTTCTTCAGAACATTTTGCATTCCAATGAAAAAAAAAAGAAGAAAGAACTATAGATTCAGATGTGAATCCAGTTGAATCAGGCAAACTCGCCCGCCTCACAACACCACCCCTCACAAATTGTTTCCACCAAAAACTAATTCCCGTACAATTCGCGATACAGCGACATGATCTAATACGCACGAAGCACGCGCCCCTCGACCCAATAAAATCCGAAATTCTAAACAAACAATTCTTGCGTCAGTCAACTAGAGCCGATCCAGCCCAAGCAAGAATACAAACAGTCTTTGAGCGCAAGAGAACCAACGCCTGGAAACACAGGCGAGAGGGCAGGGTAATCCCCCTGGGAGGAGCGGGTTACCTTGACGCCGATCTGGAGCTCCGTCACGTCGCCGGATTTCTTGGCGGAGGCTGCAACTGCAAGACGAGGCGAGGAGGAGTCAGGCTCAGATCGGATCAGAGATGTCGCTGCGTAGGGGGTGAGGGGCGCCCCCCATGGCCATGGATCGAGGCTACTTACCGACGAGTAGCAGTGCGGCGGCGGCGACGACCAGAAGAAGCTGCGGCTTCGCCATGAGTGCGATTTCTTTCTGTTTCTAGGATTTTCCGCGAGGAGGGCGAAGGGTGACTGTTTGTTTATAGAGCGGCAGCATGGCCTTTTTTTTTATTATTATTATTCTTCCTGAATCTCTTGGGCTGTTTTGATTTGGGTTTTAATGTTCGTTAGATGCAGAGTATGAACTAGTTGTTGTCAGAGTAGTTTGATTTGATTCAAGGAAAAATATTTATACACGTAGTAGAAACAGTTTTTTACAAAATCCGACGTGACAAACTAGGAGAAAACTACAAATGATCGTCCCATTTCCTTTGAAAAAAAATTGGTGGTCAAATGTTTTATTGATCATCGAATAAAATATTAACCTCTACGTGATGAAGAAAACAGGCATTGAAACATTTAAAAAGAAAATCTAAAACATAGTGAAAATAGATGTTAAAACAAATCGCTATGAATTGATGGGTTATAATTGTTCCAAACTTATGTCCTTTTATTAGAATAAAATCGTGTGATGTCTTGATGCAAAGTTTTTAATTGCCATAAATAAAATGGTTTGATCGATCATAGATGAAATAAATAGATTAGGAGAAAAAAATATTTTAAATATTGCTAGATGCATACATGCATAGATAAAAGGGATTGCAAGATAATAGGGTGCAGGTGGTTGCATGAGAGCCCGATGGCTCGGTCGACCGATCCGAACTTCCGAAGCATTTAACGGCAAAAAGTATGATTACATCTCTTTTTTCATAATCATAACTCAATTGAATAAATTTAAGCGTTGAGATCTGCAATTTACATTTTACAGTGTCAATTTATACATCATAGAATGGCAAATTATGACTTGTAGTCTCTTACAATTTACAAAGGAATGCGGAGGAAATATAGAGCCCATCAACGATTATTCATGTTCCAAACATCGCAGGTTCGCAGCAATGCGATGCGCATTCAGCAGGTCCTCGACGATCACAAGAGATTATTTATCCTCTATTAGTGCTTCATCAGAGAGCAGTAAAAATGTAGAACTATAGTGCCCAAAGCATGCAATTTTCTCATCTGACTGCCGATATCAGTGTACATGGGAAAAGGTAAGTCGAGTACAGTAAATAATTATAGGAGCACAGCTCATTACTGAAATCCTAAGGACGTTTACATGAGAAAATTACACAACGATTAGGTGAACTTCTCGAAGCAGGGTAATGTTCCTCCTACAAACAACGCGACCAAAAAACAGCTCAACCAGCGTAACAATTTACTCGTCCTCCTGGCTGCGAAGCCTGGCAAGCTTGTTGGTGACCACGATATCAAGCTGTGCAGCACGCTCCACGATCTCCTTGCGCTTCTTCGTTGAGACATTGTGAGCGATCTCAGCACAGTATGTCCTGTTTGTATGAAATGTGCAATAACAAGAATTAATCCTAACCATTAGCAAGGTTTGTAAGAGTGGACAGCATAGCATAGAACTTCAGAATATTCACTTCTCAACTTCAGTCACTAAATTGAATCGGCAGCATGTGTTACCTGTTGTGCATCATAAGTAACTCCAGCTCAGAGACATTGTGGACGACAAACTTCTTGAATTTGTTGGGAAGGTAATGCCTCGTCTTCTTGTCAGAACCATAGCCAATATTAGGCATCAAAGTGCATCCCTTGAACTTTCTCCTGACACGGGAGTCGATACCCTTTGGCCTGCGCCAGCTTGTCTACATATAGGGAAGTAAAAAGAACACCAAATTTAAGCAAGGCAGCACACAAAAGAAATAAGCGGAGAAGTGTATTCAAGTTAGAAACAAATCATCAGCATGCCAAAATCCTAAAAGCTAGCCTATCCTATGAACCTATCATTTCACACATCCATAATTTGTTAGTTAAACACAGAATACAACTATAAGCAGCTAGCCTTTTGGTTCTAGAAGCAGTTCATTTTAAAACAAAGTTGTTTGAGTGGTATACTGTGCACACGATGGGGATTACAACATAAATGATTATCATAACTAAATACTAATGACTATCAATTATGCAACTTTGGAGAGTACATCCAAATGACAGTTCATATAAGGAACTTCATATGTAACACGATAATAAGAACTTAAGTCCTGCACTTGAGAAGTTCACCCACTAATATATGCAACTGCAAAAGTTGTTCGCTGAAAGGATCAGACATAAGGATTGTTATCATGCAAAAAACAGGATTTTCTTAAGTGAACATCGGGAAAAAATGTAGGGAGAAGTCTAGGCAAGCATTCATACTCAGAATGAAGCCCACGCCTTTTGATCCAACCCACTTCACAAAGCAATGAAGTAATTGCTGTAGAAGAGGTTGCGAGAGCCACAATGCTACACTAGTGCAAGAGCTAGGGCCCTCTTCCTTTACCCCCAATGTTCACTAAGAAAATGTTTTCTCACTCAGACCTTTTACTAAGCCATCATTTCCTTTCACTCTGAACATCAAACATAAAAATCAAAAACACGACCAATTCAATTTTTTTATCTCAATTCGAAAGTTTCATGTAAATGAGTAAGCCTGCATTAGATGGCCTTTTTATTCGGAATCCATTGTCTTTAGGCATACAAAGACAGCACAATGCTCAAGCTACATGTGTAAATCTTAGCTTTACATGATTAGCCATCATGTCTAGACTTTAGACAGAATCAATTTAGCTAGTAGCGAGAGATATCAACAAACATCCTCGTCTCATTTGAGAGTAGCCTTGCCTAAGCTACAATTACAAATTAGAGGCATATAAACTGTTTTCCTAAGCATCGGATGATCATATTTCAACATCACTCTAGAATGCATTATACCATCAGAAACACCGTTAAAAAAATGCATCCGGCTCGCGCGTAGCAGCAGCGCATCTTGCATCCTGGGAGGGGCGAGCGAGGGATTTGAGGAAGGGGAGGATGCAAACCTTGAGGCCGATGTAGCGGTCGCTGTGCGGCCTCTTGAACTGCTTCACCCGCTTCTTCACGATCTTCTTCGTCAGCAACGGCACCGCCAT