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BaseInfo

ncRNA ID	novel_gma_miR1260
Species	Glycine max
Class	miRNA
Genome position	Chr4:19724634-19724779 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294479;SRR2045230;SRR1294477
Length	24
Mature sequence(if miRNA)	123 - ACCAAUCCGUGCCUCUUCCUCCUC - 146
Stem-loop(if miRNA)	--       CG   C        C                     G     C    ---G -        --  UA   ACCAAUC  UGC UCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUU    C UUUUGUAA  AC  C   |||||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||    | ||||||||  ||   UGGUUAG  ACG AGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GAAA    G AAAACAUU  UG  A CG       AU   A        C                     G     U    GCAA C        AA  UC
Stem-loop sequence	ACCAAUCCGUGCCUCUUCCUCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUUGUAAACUACACUGUAAUUACAAAACGAACGAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCAUAGAUUGGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779469.1	ncRNA:24   CUCCUCCUUCUCCGUGCCUAACCA   1   ||||||||||||*||||||||||| targets:814   GAGGAGGAAGAGCCACGGAUUGGU   837 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006586135.2	ncRNA:24   CUCCUCCUUCUCCGUGCCUAACCA   1   ||||||||||||*||||||||||| targets:814   GAGGAGGAAGAGCCACGGAUUGGU   837 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:24   CUCCUCCUUCUCCGUGCCUAACCA   1   ||||||||||||*||||||||||| targets:70   GAGGAGGAAGAGCCACGGAUUGGU   93 Target Full Sequence	1.5	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget