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BaseInfo

ncRNA ID novel_gma_miR1257
Species Glycine max
Class miRNA
Genome position Chr11:32146158-32146256 [-]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 24
Mature sequence(if miRNA) 76 - UCUCUCAUAAGCUAAAAUCAACUU - 99
Stem-loop(if miRNA) --                         UGU   G A      C    ACAG
  UCUCUCAUAAGCUAAAAUCAACUUA   GCA C UAACUU UAUG    U
  |||||||||||||||||||||||||   ||| | |||||| ||||
  AGAGAGUAUUCGAUUUUAGUUGAAU   CGU G AUUGAA AUAU    G
UA                         --U   - A      A    CUUC
Stem-loop sequence UCUCUCAUAAGCUAAAAUCAACUUAUGUGCAGCAUAACUUCUAUGACAGUGCUUCUAUAAAAGUUAAGUGCUUAAGUUGAUUUUAGCUUAUGAGAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286967.1
ncRNA:24   UUCAACUAAAAUCGAAUACUCUCU   1
  |||||||||||||||||||=||||
targets:567   AAGUUGAUUUUAGCUUAUGGGAGA   590

1.5 Glycine max cDNA, clone: GMFL01-41-C10 NA coding protein psRNATarget
AK244992.1
ncRNA:24   UUCAACUAAAAUCGAAUACUCUCU   1
  |||*|*||||*|||||||||||||
targets:516   AAGGUAAUUUGAGCUUAUGAGAGA   539

2.0 Glycine max cDNA, clone: GMFL01-18-J18 NA coding protein psRNATarget