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BaseInfo

ncRNA ID ath-miR407
Species Arabidopsis thaliana
Class miRNA
Genome position chr2:13866205-13866467 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 72 - UUUAAAUCAUAUACUUUUGGU - 92
Stem-loop(if miRNA) ---                     C         U          CAA                         A   A                    C    CC            A       A  C  A
   UGGGAAAAAUGUUAAAAAAAU GCCAACUUU AAAAAUGGGA   AAAAAUCGCCAACUCCUGAAAUGUC UUU AAUCAUAUACUUUUGGUUGA UUUU  AGAAAGAUAAUA AGCAAAG UU GU A
   ||||||||||||||||||||| ||||||||| ||||||||||   ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||  |||||||||||| ||||||| || || U
   ACCUUUUUUACAGUUUUUUUA CGGUUGAAA UUUUUACCCU   UUUUUAGUGGUUGAGGACUUUACAG AAA UUAGUGUAUGAAAACUAACU AAGA  UCUUUCUAUUGU UCGUUUC AA CA C
GUA                     A         C          -AC                         C   A                    C    AA            C       A  A  A
Stem-loop sequence UGGGAAAAAUGUUAAAAAAAUCGCCAACUUUUAAAAAUGGGACAAAAAAAUCGCCAACUCCUGAAAUGUCAUUUAAAUCAUAUACUUUUGGUUGACUUUUCCAGAAAGAUAAUAAAGCAAAGAUUCGUAAUCAACAAAACUUUGCUCUGUUAUCUUUCUAAAGAACUCAAUCAAAAGUAUGUGAUUAAAACGACAUUUCAGGAGUUGGUGAUUUUUCAUCCCAUUUUUCAAAGUUGGCAAUUUUUUUGACAUUUUUUCCAAUG

Reference

1 PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis";
Sunkar R, Zhu JK;
Plant Cell. 16:2001-2019(2004).