ncRNA ID | ath-miR407 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr2:13866205-13866467 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 72 - UUUAAAUCAUAUACUUUUGGU - 92 |
Stem-loop(if miRNA) |
---                     C         U          CAA                         A   A                    C    CC            A       A  C  A    UGGGAAAAAUGUUAAAAAAAU GCCAACUUU AAAAAUGGGA   AAAAAUCGCCAACUCCUGAAAUGUC UUU AAUCAUAUACUUUUGGUUGA UUUU  AGAAAGAUAAUA AGCAAAG UU GU A    ||||||||||||||||||||| ||||||||| ||||||||||   ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||  |||||||||||| ||||||| || || U    ACCUUUUUUACAGUUUUUUUA CGGUUGAAA UUUUUACCCU   UUUUUAGUGGUUGAGGACUUUACAG AAA UUAGUGUAUGAAAACUAACU AAGA  UCUUUCUAUUGU UCGUUUC AA CA C GUA                     A         C          -AC                         C   A                    C    AA            C       A  A  A |
Stem-loop sequence | UGGGAAAAAUGUUAAAAAAAUCGCCAACUUUUAAAAAUGGGACAAAAAAAUCGCCAACUCCUGAAAUGUCAUUUAAAUCAUAUACUUUUGGUUGACUUUUCCAGAAAGAUAAUAAAGCAAAGAUUCGUAAUCAACAAAACUUUGCUCUGUUAUCUUUCUAAAGAACUCAAUCAAAAGUAUGUGAUUAAAACGACAUUUCAGGAGUUGGUGAUUUUUCAUCCCAUUUUUCAAAGUUGGCAAUUUUUUUGACAUUUUUUCCAAUG |
1 | PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis"; Sunkar R, Zhu JK; Plant Cell. 16:2001-2019(2004). |