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BaseInfo

ncRNA ID novel_gma_miR1253
Species Glycine max
Class miRNA
Genome position Chr5:28118214-28118261 [-]
Reference genome Glycine_max_v2.0
Source SRR1451641;SRR1451644
Length 24
Mature sequence(if miRNA) 1 - GUUUGUCUGAUUCUGAGAAGAACC - 24
Stem-loop(if miRNA) ----      -UU      U     U
    UUUCUU   AUUAGA CAAAC C
    ||||||   |||||| |||||
    GAAGAG   UAGUCU GUUUG A
CCAA      UCU      -     C
Stem-loop sequence UUUCUUUUAUUAGAUCAAACUCACGUUUGUCUGAUUCUGAGAAGAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538942.3
ncRNA:24   CCAA---GAAGAGUCUUAGUCUGUUUG   1
  ||||---||||||||||||||*||||=
targets:691   GGUUUUCCUUCUCAGAAUCAGCCAAAU   717

2.5 PREDICTED: Glycine max transcription factor MYB39-like (LOC100781707), mRNA transcription factor MYB39-like(LOC100781707) coding protein psRNATarget