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BaseInfo

ncRNA ID	novel_gma_miR1248
Species	Glycine max
Class	miRNA
Genome position	Chr4:17247088-17247257 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451641;SRR1451609
Length	24
Mature sequence(if miRNA)	147 - UUCCAAAUAACCGAUGUUAACUGU - 170
Stem-loop(if miRNA)	--AAAC                    -C                               --------GGAAAA        A      A       AACAUCGGUUAUUUGGAAAA  CGAUGUUAACGUAUGUUAACAUCGGUUUUUU              AAAAAACC AUGUUA U       ||||||||||||||||||||  |||||||||||||||||||||||||||||||              |||||||| |||||| C       UUGUAGCCAAUAAACCUUUU  GUUACAAUUGCAUGCAAUUGUAGCCAAAAAA              UUUUUUGG UACAAU G UGUCAA                    UA                               AAAAAAAAAAAAUG        C      U
Stem-loop sequence	AAACAACAUCGGUUAUUUGGAAAACCGAUGUUAACGUAUGUUAACAUCGGUUUUUUGGAAAAAAAAAACCAAUGUUAAUCGUUAACAUCGGUUUUUUGUAAAAAAAAAAAAAAAAAACCGAUGUUAACGUACGUUAACAUUGAUUUUUCCAAAUAACCGAUGUUAACUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006593646.2	ncRNA:24   UGUCAAUUGUAGCCAAUAAACCUU   1   =*=|*|*||||=|||||||||||| targets:315   GAGGAUCACAUUGGUUAUUUGGAA   338 Target Full Sequence	2.5	PREDICTED: Glycine max WPP domain-interacting tail-anchored protein 1-like (LOC100810969), transcript variant X2, mRNA	WPP domain-interacting tail-anchored protein 1-like(LOC100810969)	coding protein	psRNATarget
XM_003543848.3	ncRNA:24   UGUCAAUUGUAGCCAAUAAACCUU   1   =*=|*|*||||=|||||||||||| targets:556   GAGGAUCACAUUGGUUAUUUGGAA   579 Target Full Sequence	2.5	PREDICTED: Glycine max WPP domain-interacting tail-anchored protein 1-like (LOC100810969), transcript variant X1, mRNA	WPP domain-interacting tail-anchored protein 1-like(LOC100810969)	coding protein	psRNATarget
XM_014765270.1	ncRNA:24   UGUCAAUUGUAGCCAAUAAACCUU   1   =*=|*|*||||=|||||||||||| targets:556   GAGGAUCACAUUGGUUAUUUGGAA   579 Target Full Sequence	2.5	PREDICTED: Glycine max WPP domain-interacting tail-anchored protein 1-like (LOC100810969), transcript variant X3, mRNA	WPP domain-interacting tail-anchored protein 1-like(LOC100810969)	coding protein	psRNATarget