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BaseInfo

ncRNA ID osa_circ_039554
Species Oryza sativa
Class circRNA
Genome position 9:18175693-18175916[-]
Reference genome RGAPv7
Source PlantcircBase
Method circseq_cup
Type exonic
Splice junction sequence TTGTTGATAGCACCAGCACCCTCAGACATGCTCCACGGATAAAGGGCAGCTCCAAGCGAAGCATTTCAGCATCTTTTACAGGATCCAGATTTGCAATGTAAATGGATGCCTGTGGCCAGTGAATCCATTCAAAGTAAGGGTCTTCTAGACTTTCTGGAAGACAGAGACCATGGTCAATAGGAATGAGTTCAGTCTGCACT
Tissues root
Exon boundary No-No
Splicing signals TA-CC
circRNA sequence TTGTTGATAGCACCAGCACCCTCAGACATGCTCCACGGATAAAGGGCAGCTCCAAGCGAAGCATTTCAGCATCTTTTACAGGATCCAGATTTGCAATGTATTCGAGTTCCTCCTCAGTGAAAGGAATGGATGCCTGTGGCCAGTGAATCCATTCAAAGTAAGGGTCTTCTAGACTTTCTGGAAGACAGAGACCATGGTCAATAGGAATGAGTTCAGTCTGCACT
Genomic sequence TTGTTGATAGCACCAGCACCCTCAGACATGCTCCACGGATAAAGGGCAGCTCCAAGCGAAGCATTTCAGCATCTTTTACAGGATCCAGATTTGCAATGTATTCGAGTTCCTCCTCAGTGAAAGGAATGGATGCCTGTGGCCAGTGAATCCATTCAAAGTAAGGGTCTTCTAGACTTTCTGGAAGACAGAGACCATGGTCAATAGGAATGAGTTCAGTCTGCACT