ncRNA ID | novel_gma_miR1244 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:31463116-31463327 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451641 |
Length | 25 |
Mature sequence(if miRNA) | 188 - CUGUGAAUUGUACAAUAACCUGACC - 212 |
Stem-loop(if miRNA) |
---CU               A  -     -A UG  ---A       AAAA     AAU     --      AAGAGAA  UG A     CC  UU        A UG  AAA      GUGAAUUGUACAAUA CC UGACC  G  CU    UCUUGAG    GUGUA   GCGUA  GUGUUA       AG  U GGUUU  UA  UAGGAACC G  UU   G      ||||||||||||||| || |||||  |  ||    |||||||    |||||   |||||  ||||||       ||  | |||||  ||  |||||||| |  ||      CACUUAAUAUGUUAU GG ACUGG  U  GA    AGAAUUU    UGCAU   UGUAU  CGCGAU       UU  G UCAAG  AU  AUCCUUGG U  GA   A ACGAU               G  U     AG GU  GCAC       ---G     -GU     AA      -GUUAAA  GU A     -A  UU        A GU  AAA |
Stem-loop sequence | CUGUGAAUUGUACAAUAACCUGACCAGUGCUAUCUUGAGAAAAGUGUAAAUGCGUAGUGUUAAAGAGAAAGUGUAGGUUUCCUAUUUAGGAACCAGUGUUAAAGAAAAAGUGUAGGUUCCUAUUUAAGAACUAGUGUUAAAUUGUAGCGCAAUAUGUUGUACGUGUUUAAGACACGAGUGUGAGGUCAUGGGUAUUGUAUAAUUCACUAGCA |