Search result

BaseInfo

ncRNA ID	osa_circ_039548
Species	Oryza sativa
Class	circRNA
Genome position	9:18152442-18155074[-]
Reference genome	RGAPv7
Source	PlantcircBase
Method	SMALT and Segemehl
Type	exonic
Splice junction sequence	CTCCTTGTCCTCTTTCTCAGCAATCTCCTGAATCATATCAAATGTCTTCCTGACAAGTCTTTTGCGCATGATCCTGACCTGAAACATTAGGATCCCAATCACTGGCATTTCGCAGAAGAAGCCAAATCCAACATTCGACCTAGACGCGGACTCGTCAGCCCCACCTCAGCCTGGTACTCGAACTGCTCGCCGGCCGCCTC
Tissues	leaf and panicle
Exon boundary	Yes-No
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTCCTTGTCCTCTTTCTCAGCAATCTCCTGAATCATATCAAATGTCTTCCTGACAAGTCTTTTGCGCATGATCCTGACCTGAAACATTAGGATCCCAATCAGCGAACCGTTATTATTCAGACATCAATAACTCCCCAGAGTCTAGTAAGCAGTAACTATAAGTTAAACCGCAGATGTATTATATCCAGAACTTACAATACGACTTTCTTGAAGAATCTCACGGGAAACATTGAGAGGAAGATCATTTGAGTCCACTACACCCTTTACAAAGCTTAAGTATCTAGGGAACTGCAAAGAGAGTAATTCATTCAACATTATTATCATAGTAACGGAAGAACTAACATCTAGCTATAATGTAAACAGAGCAGTAAAAAATACAGCAACATACCAACTCGCCATCGAAGTCATCTGATATGAAGACTCTCTTAACATACAGCCGGATATTCTTGGTCTTAGGGTTCATTATCTCCTCATTGCTAAGAGGTGCCATTCCTGGAATGTAGAGGACGCTCCTGAATTCCACCTCACCCTGTTTAGAACATCCGTTTCATCATGAATGTTTCTACGCATGAAAATGATAAACACAAACAAGTAAAGTTTGACAAGTCCAGGCACCTCTGTTGTAAAGTGGGTGTAAGCAAGAGGATCCAAAAACTCATTGAATGCCTTCTTGTAGAATTCATTGTACTCAGTTTTCTCAACTTCCTTTGGATTTCTCATCTGCATGGAAGAAAATTTCCATTAATAATAGAACACATATCTGTTCATGCAGCTATGGGAGATTGAGAAAATCAAAGACATGTTTCATGTTATAACTGCAGCGGAGGCACCAATTCTAGGTAACAAACTAATCAGGTGTTGCCTTACCCATATGGGCTTTGTTTCATTAGCCAATTCCCAATCCCAGTACTTCTCAGTGATTGTTTTCTTTTTCTTCTTCTTTTCACCCTATCGAACAAAGGGAAATACATCACATACAAATATACTGGAGACAACTTCAACATGAAGGCAACAAAATTACGCAGGAAACTAACCTCTGTTGCCTCTTCACCTTCTTTCGGTTCTTCTTCTTCAACCTAGGTACACAAACAGGGAAAAGGAGAGTGGAAATTTAGTAAGCACGAACTGCAGTAATACTCAGGATTCAGAAGGATTCTAGCATGGTCTTTCTCTACCTCAACTGTTCTTGATTTCTCCTGCCATGTATATATGGGGAATGAAACAAACTGGGAATAGTTCTTAACTAAACCTTGAATACGTCCAGGGTCAGCAAACTCGTACTTATCATCATCCTAAAAGAACAAAAGAGATAGTTAAAGATGTGCTACGAAATGAAAATTAGTAAACAATGTGCTAGGAAGTGAATTTAATCACATATACATAGTTGTGTACTGGTGAGTTAGTATAAGCTACTCACTCTTAAAAACAGAGTAATCTGTGTTCCGCGTGTCAACATTTTCTCAGGATCGGTTTCTTCCTTAATAACATATGAGCTGCTGTCAGCCATAGCTTCCCATACATACTGTTTGTCTGCCTTTGGACTCTTAGTGGAAACCACAACCTGCAAGGAAATGAAACGACAACAAGCTAGAGTAACATTTTCTAATTGTAAATTCAATCCAATATTCAATTTGAGAGGGAAGGTTTTACAAGCATTGAAAATCCAAAAAAAAAAACCTTGGGATATTGTGTACCTTCTCTGCAACAAGAAAAGCCGAATAAAATCCCACACCAAATTGACCAATAAGTCCATTATCTGCACCAAGATCTTTGTTCTCCTGATAAGAAGCAGGGTTTAGCATGGCAGCAACAAATAATAATAATAATAATAATAATAATAATAATAATAATAGAACGCAACACATATGTGACTACATGTGGGCAAAGTGCACCTTAAGAGCCTTCAAAAATTTGGAGGTGCCACTTTGGGCGATGGTTCCAAGGCAATCTTTGAGTTCATCTTTGGTCATCCCAATGCCAGTATCACTGTAAGATGCAAAACAATGAGATCGCCTGACGAGTTCCAGTGCAATTGATGCTTAAAATGATTAGTGGATAAAAATAGAACTCACGTGATAGTAATTGTGCCAGCCTCTGGGTCGGGTTTGATCCTAATTTCCAACTCACCGCCATCGGACAATACAGAGGAATCAGTTACACTGAGAAATCTCAGCTTATCCAGCGCGTCACTTGCATTACTGAGGGGAAACATAAAATGTGTCAGCATCAAATGGTACTGAATTGCAGTTTGTGGATAGTGATTCCTCCTTGGGCGCGACTAATTTAAAAACCCTAACAATGAGTAGAAAACTAACCTTACGAGTTCACGGAGAAAAACCTCCTTGTGGCTATACAGGCTGTGGACAATCAAATCCAGCAATCGGCTGACCTGCAGGACAAGGAGAAACATTGCATGACCAACTAATCCTCGAGCTACAAATTCTAAAAACAATAAGCAGATTGTAGGAACAGTTCATGACAATGTCAGCTTCAGTTATCTAAACACGAATTCCAAAAACGCATATCAATCAACACTGGCATTTCGCAGAAGAAGCCAAATCCAACATTCGACCTAGACGCGGACTCGTCAGCCCCACCTCAGCCTGGTACTCGAACTGCTCGCCGGCCGCCTC