Search result

BaseInfo

ncRNA ID osa_circ_039507
Species Oryza sativa
Class circRNA
Genome position 9:17747490-17748183[+/-]
Reference genome RGAPv7
Source PlantcircBase
Method circseq_cup
Type exonic
Splice junction sequence AAGCCTCTCGCCGAGTCCACCGTCATCGTCGAGTACATCGACGAGGCCTGGAAGCACGGCTACCCCATCATGCCCTCCGACCCCTTCGACCGTGCTCAGGCTTTACGTTGCATTGGATGTTGTTATAGTGCAACGCTGCTCTGTACCCGATCTTCATGACGACCGGAGAGGAGCAGAGAAAGCTGGTGCACGAGGCCCAG
Tissues root
Exon boundary No-No
Splicing signals GC-CA
circRNA sequence AAGCCTCTCGCCGAGTCCACCGTCATCGTCGAGTACATCGACGAGGCCTGGAAGCACGGCTACCCCATCATGCCCTCCGACCCCTTCGACCGTGCTCAGGCGAGGTTCTGGGCCAGGTTCGCTGAAGAGAAGTGCAACGCTGCTCTGTACCCGATCTTCATGACGACCGGAGAGGAGCAGAGAAAGCTGGTGCACGAGGCCCAG
Genomic sequence AAGCCTCTCGCCGAGTCCACCGTCATCGTCGAGTACATCGACGAGGCCTGGAAGCACGGCTACCCCATCATGCCCTCCGACCCCTTCGACCGTGCTCAGGCGAGGTTCTGGGCCAGGTTCGCTGAAGAGAAGGTATAATCCAACTTTCTCTACTGATGACTCAAATCCAAATCCAATCCTTTTTTTTTCTGACCTCTTAGTTAGATTGATTGGCTTTGCATTGGAAAAGTGATTTCATCACTCGGGGATATCCCCTCCCCTCGTTTTTTACATGACATCTAAATAGTCATAAGAAAATTTGGTAACATAGATTAATATAAAATATATCACTCCACAAACATGCAATTTTAAATTTAATTTCTACAAGTTGTAACAAAAATAACAAATATAGCTGCGAATGTACGATAACTATTTTCAGTTTAATTTATTTTTTTTTGTTGCAAGTTGTATAAGTTGAATTTATTGAATTTTGTATAGCATGTCTGTGGAGTGATATATTTCATAGTATTAATCTATGTTGTTAATTTTTTTAATAACTATATAGATGATATACAAACAAGAGGATATTCCCTTGAGAAATGAAAATCCACGTTCCTTTACGTTGCATTGGATGTTGTTATAGTGCAACGCTGCTCTGTACCCGATCTTCATGACGACCGGAGAGGAGCAGAGAAAGCTGGTGCACGAGGCCCAG