Search result

BaseInfo

ncRNA ID osa_circ_039501
Species Oryza sativa
Class circRNA
Genome position 9:17743503-17744102[+]
Reference genome RGAPv7
Source PlantcircBase
Method circseq_cup/NA
Type exonic
Splice junction sequence GTGCTCAACGAAACAAGCCTTTGGTGGTTCGATAGGACCCGTCATATCACTCCAAATGCAGTAGTTTCTTCTCCTGATAAGAATGTGACAATTGCAAAAACTTATATGCAGGAATGGTAAAGAATCAGAAGCTATCTGCAAATATACTTACACCAACAACTAAAGCTGCAGATCATGATGTTCCTGTCACTCCTGAAGAG
Tissues root/shoot, root
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence ATCATGATGTTCCTGTCACTCCTGAAGAGGTGCTCAACGAAACAAGCCTTTGGTGGTTCGATAGGACCCGTCATATCACTCCAAATGCAGTAGTTTCTTCTCCTGATAAGAATGTGACAATTGCAAAAAGTGAGGGGATATGTTACTGGAAGCACTGATACATCTTTGTGGACTGTTTATAACAAAGGTGCGAGGAACTATTGTGGAAATGTTCTACGTGATGGAATGGTAAAGAATCAGAAGCTATCTGCAAATATACTTACACCAACAACTAAAGCTGCAG
Genomic sequence GTGCTCAACGAAACAAGCCTTTGGTGGTTCGATAGGACCCGTCATATCACTCCAAATGCAGTAGTTTCTTCTCCTGATAAGAATGTGACAATTGCAAAAAGGTGCTCAGTTTTTCCAGTTGAATTTGTTGGTGAGACCTAAGGCTTGCTGCATTTACTGATTATTTCTCCTACTGCTTTGCAATCATATCCCTCAGAATTTTGTTGGCTGTGTTGATCAATTAGTTCTTTGTTTTCGTGATTCTTATGAATCTTGTCTATCATCCTTTTTTTTTAAAAAAAAAAATCTTATGGAGAACTGTTATCTGTGTTGATCAATTAGCTTTATTTTCATGCTTTTTTTTCAGTGAGGGGATATGTTACTGGAAGCACTGATACATCTTTGTGGACTGTTTATAACAAAGGTGCGAGGAACTATTGTGGAAATGTTCTACGTGATGGTATGCTGAACCAACAAACATCCAAATTGGATTTTTTTTCTTTACTTACAGTGAGTGGCCTCTTATATGCAGGAATGGTAAAGAATCAGAAGCTATCTGCAAATATACTTACACCAACAACTAAAGCTGCAGATCATGATGTTCCTGTCACTCCTGAAGAG