| ncRNA ID | bra-miR9556-3p |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | chrA7:19158445-19158534 [-] |
| Reference genome | Brapa_1.1 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 2 - UCUACUUUCACCAAUUGGCCU - 22 |
| Stem-loop(if miRNA) |
AUU U ---UU UUAUA - U GUCAAUUGGUGA AGUAG CUUAAGCG GUG GAU U |||||||||||| ||||| |||||||| ||| ||| CGGUUAACCACU UCAUC GAGUUCGU CAC CUA C UUC U UUAUU --UGG U U |
| Stem-loop sequence | AUUGUCAAUUGGUGAUAGUAGUUCUUAAGCGUUAUAGUGGAUUUCUAUCUCACGGUUGCUUGAGUUAUUCUACUUUCACCAAUUGGCCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009150861.2 |
|
2.5 | PREDICTED: Brassica rapa histone acetyltransferase HAC12-like (LOC103872460), transcript variant X2, mRNA | histone acetyltransferase HAC12-like(LOC103872460) | coding protein | psRNATarget | |||||||||
| XM_009150860.2 |
|
2.5 | PREDICTED: Brassica rapa histone acetyltransferase HAC12-like (LOC103872460), transcript variant X1, mRNA | histone acetyltransferase HAC12-like(LOC103872460) | coding protein | psRNATarget |
| 1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |