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BaseInfo

ncRNA ID novel_gma_miR1228
Species Glycine max
Class miRNA
Genome position Chr16:4133755-4133833 [+]
Reference genome Glycine_max_v2.0
Source SRR1451641;SRR1451641;SRR3160569
Length 21
Mature sequence(if miRNA) 59 - UUCCUGAUCAAAAUACUCAAA - 79
Stem-loop(if miRNA) --                               -     U
  UGAGUAUUUUGAUCAGGAAUUUUAGUUAACU AAAUG U
  ||||||||||||||||||||||||||||||| |||||
  ACUCAUAAAACUAGUCCUUAAAAUCAAUUGA UUUAU A
AA                               A     A
Stem-loop sequence UGAGUAUUUUGAUCAGGAAUUUUAGUUAACUAAAUGUUAAUAUUUAAGUUAACUAAAAUUCCUGAUCAAAAUACUCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777393.1
ncRNA:21   AAACUCAUAAAACUAGUCCUU   1
  |||||||||||||||||*||*
targets:1425   UUUGAGUAUUUUGAUCAUGAU   1445

2.5 PREDICTED: Glycine max uncharacterized LOC100802473 (LOC100802473), mRNA uncharacterized LOC100802473(LOC100802473) coding protein psRNATarget
XM_003534113.3
ncRNA:21   AAACUCAUAAAACUAGUCCUU   1
  |||||||||||||||||*||*
targets:1330   UUUGAGUAUUUUGAUCAUGAU   1350

2.5 PREDICTED: Glycine max uncharacterized LOC100775751 (LOC100775751), mRNA uncharacterized LOC100775751(LOC100775751) coding protein psRNATarget