Search result

BaseInfo

ncRNA ID novel_gma_miR1225
Species Glycine max
Class miRNA
Genome position Chr15:47654373-47654593 [-]
Reference genome Glycine_max_v2.0
Source SRR1451641
Length 24
Mature sequence(if miRNA) 1 - UCGCGAGAAUCGUCUUAGAAUAAC - 24
Stem-loop(if miRNA) --C    -       G   G      --GA  C             C            CA  C  GG    ACA                               A     U
   AUUC AAGACGA UUC UCGCGA    AC GUUUUAGAAUGUA CACAUUUUAAGA  GU UU  ACAA   ACCGUUUUUGAAUGUGUUACAUUCUAAGACG UUUUG C
   |||| ||||||| ||| ||||||    || ||||||||||||| ||||||||||||  || ||  ||||   ||||||||||||||||||||||||||||||| |||||
   UAAG UUCUGCU AAG AGCGCU    UG UAGAGUCUUACAU GUGUAAGAUUCU  UA AA  UGUU   UGGCAGAAGCUUACACAAUGUAAGAUUCUGC AAGAC G
CAA    A       -   -      ACAC  U             U            AC  A  AA    CAC                               C     C
Stem-loop sequence CAUUCAAGACGAGUUCGUCGCGAGAACCGUUUUAGAAUGUACCACAUUUUAAGACAGUCUUGGACAAACAACCGUUUUUGAAUGUGUUACAUUCUAAGACGAUUUUGUCGCCAGAACCGUCUUAGAAUGUAACACAUUCGAAGACGGUCACUUGUAAAAAAUCAUCUUAGAAUGUGUUACAUUCUGAGAUUGUCACAUCGCGAGAAUCGUCUUAGAAUAAC