ncRNA ID | bra-miR9556-5p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA7:19158445-19158534 [-] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 67 - GUCAAUUGGUGAUAGUAGUUC - 87 |
Stem-loop(if miRNA) |
AUU            U     ---UU        UUAUA   -   U    GUCAAUUGGUGA AGUAG     CUUAAGCG     GUG GAU U    |||||||||||| |||||     ||||||||     ||| |||    CGGUUAACCACU UCAUC     GAGUUCGU     CAC CUA C UUC            U     UUAUU        --UGG   U   U |
Stem-loop sequence | AUUGUCAAUUGGUGAUAGUAGUUCUUAAGCGUUAUAGUGGAUUUCUAUCUCACGGUUGCUUGAGUUAUUCUACUUUCACCAAUUGGCCUU |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |