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BaseInfo

ncRNA ID bra-miR395c-5p
Species Brassica rapa
Class miRNA
Genome position chrA7:18568920-18569029 [-]
Reference genome Brapa_1.1
Source miRBase
Length 21
Mature sequence(if miRNA) 73 - GUUCCUCUGAGCACUUCAUUG - 93
Stem-loop(if miRNA) GU      UU   UA         UG         U    UAUA      UUUCUA
  CGGAUG  UCC  GAGUUCCUC  AGCACUUCA UGGA    ACAUUU      U
  ||||||  |||  |||||||||  ||||||||| ||||    ||||||
  GCUUAC  AGG  CUCAAGGGG  UUGUGAAGU ACCU    UGUAAA      C
--      UC   UC         GU         C    --UA      UUAAAA
Stem-loop sequence GUCGGAUGUUUCCUAGAGUUCCUCUGAGCACUUCAUUGGAUAUAACAUUUUUUCUAUCAAAAUUAAAUGUAUUCCACUGAAGUGUUUGGGGGAACUCCUGGACUCAUUCG

Reference

1 PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis";
Jiang J, Lv M, Liang Y, Ma Z, Cao J;
BMC Genomics. 15:146(2014).