ncRNA ID | bra-miR395c-5p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA7:18568920-18569029 [-] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 73 - GUUCCUCUGAGCACUUCAUUG - 93 |
Stem-loop(if miRNA) |
GU      UU   UA         UG         U    UAUA      UUUCUA   CGGAUG  UCC  GAGUUCCUC  AGCACUUCA UGGA    ACAUUU      U   ||||||  |||  |||||||||  ||||||||| ||||    ||||||   GCUUAC  AGG  CUCAAGGGG  UUGUGAAGU ACCU    UGUAAA      C --      UC   UC         GU         C    --UA      UUAAAA |
Stem-loop sequence | GUCGGAUGUUUCCUAGAGUUCCUCUGAGCACUUCAUUGGAUAUAACAUUUUUUCUAUCAAAAUUAAAUGUAUUCCACUGAAGUGUUUGGGGGAACUCCUGGACUCAUUCG |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |