Search result

BaseInfo

ncRNA ID osa_circ_039118
Species Oryza sativa
Class circRNA
Genome position 9:14058155-14059565[-/-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence CTTTCCTTTCGCTTCTCCAAGAATCGGGCAAGGGATGCCTTCCGCGCTTGAGGGACAGCTGCAATGAAAAAAAGAGAAATAAATCATACACTGTAACAATGCCGCCGACGACGACGACCTGAACGACATCAACGCGGCCCTGCTCGCGAACGACCAATCCATCGCCGCCGCTGCCGCTCCTCCTCCTGCTCCAAAGTAAT
Tissues leaf/root/shoot, root, seed, pistil
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTTCCTTTCGCTTCTCCAAGAATCGGGCAAGGGATGCCTTCCGCGCTTGAGGGACAGCTGCAATGAAAAAAAGAGAAATAAATCATACACTGTAACAATTCATCTGAAGTTCTAACTACTATCATAACATCACAATACAATTCATGCAAGCAATTAATAGGCATACCTCTCGGCATAATAGCTGCAGCAGTGGTAGTGGCTAGTGTCTCAGGCTGGGCCGGAGGAGGCAAACTTGTGGGAGGAACAACCAATGGACCAGAAGATTTTGTCACGTTGGAGTCGACATTAGAGCTTGAGGCACTCCGTGGAAGACTTGTAGCTTGTGACACAACGGAGATAGGTTTGGAAATGGCTGGCACGGGAGACGAAACAAGCTGCGGTTTCTGAAGCATCATCGGTTTTGTAGGCGAAACCTCAGGTACAGTGACTTTTGCTGGGGGAAAGACATGTGCCTCTGGCATACGAGCAACGGTAGTCGGCGCACTTGGAAGAGATCCTCTGCTAGCTAAGAACATGAGTTCCTGAGCCTGCAACAATGAGAAACAGCTATTAAAACATGTCAATTGGTAATAATCATCCATAGTACAGCACAAAGATGCACCATCTGTCACAATGAAATCATACCTTCTCCGGCGAGACGTTGTTGAATACATTTACAGAACCAGCATAAAAGATGGTCAATTGCGCCGCCTTCGCCTTCGGCATGTCCCTATACAAAGCAAGACAAGCTATATATTTCAGTCCAATTTCATCTTTCATTTCCACTCTCACAAAAGTCACAAACCTCGTGCTCGATAACAGAGCGGATTAGCTACCTTGTTCCGTACACACCGACCGTAGATCCGGCAACCGCATTGCCCATGGCGAAAGGCGGCTGCTTGAACGCGCCACCACCGGCGCCGACGGCATTCGGGAGGTTGGGCGAGCTCTGAACCCTGAACATCGGATTGTTCGGGTTGAACGGCGACGAGGCCGGAATCACTCTAGCCCCATTCAGAACATGCGGTGGCTGGCCACGGTGAGCGCCGTGCACGGCGGCGGCGGCGGCGTACTGCGGGATGCCGTGGCTCTCGGCACCAAACGATTTCTGCAAAAAACATCCACATATCCACAAACTAATTAATTAGGATATCAATATCAAACAGAAATTCACAAGCAGCAAGTGAGCAAGAACAAAATCAAGAAGAAGAAGAACAGCGCAAGCCACCTGTCTTGCGAGGACGTGCGAGGCCTGCTGCATCTTGGCGCCGTCTAACGCCGAGAAGTGTGGGAACGCGAGCTCCCTCGTCTCCTCCCTCGCCGCCGCCGCCGCCGCCGACGACGACGACCTGAACGACATCAACGCGGCCCTGCTCGCGAACGACCAATCCATCGCCGCCGCTGCCGCTCCTCCTCCTGCTCCAAAGTAAT