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BaseInfo

ncRNA ID	novel_gma_miR1198
Species	Glycine max
Class	miRNA
Genome position	Chr10:21219203-21219382 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451640;SRR2968974;SRR835759
Length	21
Mature sequence(if miRNA)	1 - CUAAAAAAAAGUGUCAAGGAC - 21
Stem-loop(if miRNA)	--                                  CA     UA            C    -AUUG                  GCCUU   CCUUGAUACUUUUUUUUAGUCCUUGAUAAAUUAG  AAUUU  UGUUUGCUCCUU AUAA     UUUUCAUUUGUUAUUAGU     U   ||||||||||||||||||||||||||||||||||  |||||  |||||||||||| ||||     ||||||||||||||||||     G   GGAACUGUGAAAAAAAAUCAGGAACUAUUUAAUC  UUAAA  GCAAACGAGGGA UAUU     AAAAGUAAACAAUAAUCA     A CA                                  AC     UC            C    AAGAA                  GUAAA
Stem-loop sequence	CCUUGAUACUUUUUUUUAGUCCUUGAUAAAUUAGCAAAUUUUAUGUUUGCUCCUUCAUAAAUUGUUUUCAUUUGUUAUUAGUGCCUUUGAAAAUGACUAAUAACAAAUGAAAAAAGAAUUAUCAGGGAGCAAACGCUAAAUUCACUAAUUUAUCAAGGACUAAAAAAAAGUGUCAAGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772135.1	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   *||||||||||||||||||** targets:934   AUCCUUGACACUUUUUUUUCU   954 Target Full Sequence	2.5	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X4, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_014772134.1	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   *||||||||||||||||||** targets:958   AUCCUUGACACUUUUUUUUCU   978 Target Full Sequence	2.5	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X3, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_006604259.2	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   *||||||||||||||||||** targets:975   AUCCUUGACACUUUUUUUUCU   995 Target Full Sequence	2.5	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X5, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_003553334.3	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   *||||||||||||||||||** targets:1051   AUCCUUGACACUUUUUUUUCU   1071 Target Full Sequence	2.5	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X1, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_006604258.2	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   *||||||||||||||||||** targets:1067   AUCCUUGACACUUUUUUUUCU   1087 Target Full Sequence	2.5	PREDICTED: Glycine max protein arv1 homolog (LOC100813416), transcript variant X2, mRNA	protein arv1 homolog(LOC100813416)	coding protein	psRNATarget
XM_014776819.1	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   |*=||||||||||||||||*| targets:1823   GCUCUUGACACUUUUUUUUUG   1843 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g22104-like (LOC100784792), transcript variant X3, mRNA	BTB/POZ domain-containing protein At3g22104-like(LOC100784792)	coding protein	psRNATarget
XM_003527429.3	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   |*=||||||||||||||||*| targets:2070   GCUCUUGACACUUUUUUUUUG   2090 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g22104-like (LOC100784792), transcript variant X1, mRNA	BTB/POZ domain-containing protein At3g22104-like(LOC100784792)	coding protein	psRNATarget
XM_006582278.2	ncRNA:21   CAGGAACUGUGAAAAAAAAUC   1   |*=||||||||||||||||*| targets:2236   GCUCUUGACACUUUUUUUUUG   2256 Target Full Sequence	2.5	PREDICTED: Glycine max BTB/POZ domain-containing protein At3g22104-like (LOC100784792), transcript variant X2, mRNA	BTB/POZ domain-containing protein At3g22104-like(LOC100784792)	coding protein	psRNATarget