ncRNA ID | novel_gma_miR1197 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:16529812-16529919 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479;SRR1295517;SRR1295523 |
Length | 24 |
Mature sequence(if miRNA) | 85 - AAGAACAUGAGGACCAAAUUGAAC - 108 |
Stem-loop(if miRNA) |
--               A            ----       U   -A    CAAAU   UUAAUUUGGUCCUCA GUUCUUAAAAAU    GAAUCAA UUG  UCAU     U   ||||||||||||||| ||||||||||||    ||||||| |||  ||||     C   AGUUAAACCAGGAGU CAAGAAUUUUUA    CUUGGUU AAU  AGUA     U CA               A            AACU       U   AA    AAAAU |
Stem-loop sequence | UUAAUUUGGUCCUCAAGUUCUUAAAAAUGAAUCAAUUUGAUCAUCAAAUUCUUAAAAAUGAAAUAAUUUGGUUCUCAAAUUUUUAAGAACAUGAGGACCAAAUUGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516937.3 |
|
2.5 | PREDICTED: Glycine max macrophage migration inhibitory factor homolog (LOC100500101), mRNA | macrophage migration inhibitory factor homolog(LOC100500101) | coding protein | psRNATarget |