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BaseInfo

ncRNA ID novel_gma_miR1197
Species Glycine max
Class miRNA
Genome position Chr1:16529812-16529919 [+]
Reference genome Glycine_max_v2.0
Source SRR1294479;SRR1295517;SRR1295523
Length 24
Mature sequence(if miRNA) 85 - AAGAACAUGAGGACCAAAUUGAAC - 108
Stem-loop(if miRNA) --               A            ----       U   -A    CAAAU
  UUAAUUUGGUCCUCA GUUCUUAAAAAU    GAAUCAA UUG  UCAU     U
  ||||||||||||||| ||||||||||||    ||||||| |||  ||||     C
  AGUUAAACCAGGAGU CAAGAAUUUUUA    CUUGGUU AAU  AGUA     U
CA               A            AACU       U   AA    AAAAU
Stem-loop sequence UUAAUUUGGUCCUCAAGUUCUUAAAAAUGAAUCAAUUUGAUCAUCAAAUUCUUAAAAAUGAAAUAAUUUGGUUCUCAAAUUUUUAAGAACAUGAGGACCAAAUUGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516937.3
ncRNA:24   CAAGUUAAACCAGGAGUACAAGAA   1
  *||==|||||*||||||||||*||
targets:829   AUUUGAUUUGAUCCUCAUGUUAUU   852

2.5 PREDICTED: Glycine max macrophage migration inhibitory factor homolog (LOC100500101), mRNA macrophage migration inhibitory factor homolog(LOC100500101) coding protein psRNATarget