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BaseInfo

ncRNA ID novel_gma_miR1195
Species Glycine max
Class miRNA
Genome position Chr10:31447756-31447799 [-]
Reference genome Glycine_max_v2.0
Source SRR1451640;SRR1451646
Length 22
Mature sequence(if miRNA) 1 - UGCAUUGGAGCUUGUAGGCCUA - 22
Stem-loop(if miRNA) --   AGG       --     A
  GGC   GCAGGCU  GAUGC A
  |||   |||||||  ||||| G
  CCG   UGUUCGA  UUACG C
AU   -GA       GG     U
Stem-loop sequence GGCAGGGCAGGCUGAUGCAAGCUGCAUUGGAGCUUGUAGGCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT095722.1
ncRNA:22   AUCCGGAUGUUCGAGGUUACGU   1
  ||||||||||||||||||||*|
targets:104   UAGGCCUACAAGCUCCAAUGGA   125

1.5 Soybean clone JCVI-FLGm-15I19 unknown mRNA NA coding protein psRNATarget
XM_006587612.2
ncRNA:22   AUCCGGAUGUUCGAGGUUACGU   1
  ||||||||||||||||||||*|
targets:72   UAGGCCUACAAGCUCCAAUGGA   93

1.5 PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X2, mRNA maltose excess protein 1, chloroplastic-like(LOC102668505) coding protein psRNATarget
XM_006587611.2
ncRNA:22   AUCCGGAUGUUCGAGGUUACGU   1
  ||||||||||||||||||||*|
targets:77   UAGGCCUACAAGCUCCAAUGGA   98

1.5 PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X1, mRNA maltose excess protein 1, chloroplastic-like(LOC102668505) coding protein psRNATarget
AK286453.1
ncRNA:22   AUCCGGAUGUUCGAGGUUACGU   1
  ||||||||=|||||||||||*|
targets:1558   UAGGCCUAUAAGCUCCAAUGGA   1579

2.5 Glycine max cDNA, clone: GMFL01-28-L19 NA coding protein psRNATarget
XM_006589799.1
ncRNA:22   AUCCGGAUGUUCGAGGUUACGU   1
  ***|||||*|=|||||||||||
targets:264   AUUGCCUAGAGGCUCCAAUGCA   285

2.5 PREDICTED: Glycine max uncharacterized LOC102661567 (LOC102661567), mRNA uncharacterized LOC102661567(LOC102661567) coding protein psRNATarget