Search result

BaseInfo

ncRNA ID	osa_circ_038985
Species	Oryza sativa
Class	circRNA
Genome position	9:11881603-11884370[+]
Reference genome	RGAPv7
Source	PlantcircBase
Method	SMALT and Segemehl
Type	exonic
Splice junction sequence	GATGAAGGAGAGGATGAGGGTTGGTCCAGGAGGGGTCACTCAGCTCATTGTGGAGAGCATTCATCAGAAATGGAGGGTGGAAGAGGTGGTCAAGCTGAGATGACCATCAGGTACGAATGCAAGTTGCTGGGGAAAAACCAGATGCGGAGTTACTTCAAACAGTTGAGGCTGATTTGTCTAAAGATGACGATAAAATAGAG
Tissues	leaf and panicle
Exon boundary	No-Yes
Splicing signals	AG-GT
circRNA sequence	NA
Genomic sequence	GATGAAGGAGAGGATGAGGGTTGGTCCAGGAGGGGTCACTCAGCTCATTGTGGAGAGCATTCATCAGAAATGGAGGGTGGAAGAGGTGGTCAAGCTGAGATTTGAAGGACCTCCAAGCCTGAACATGAAGAGAACTCATGATATACTAGAGGTGCGGTTACCTTTTGCTGTCTCATGTTTTGTTCATTCACAATTTTTTCGTGGCGTGAAATCTGATAGTTACTTTGTTATCTTGCTCTTATCTATCAGGAGAGGACTGGAGGAATTGTAATATGGAGGTCAGGGAGATCAGTTGTTTTATATAGGGGAATGAACTACAACCTTCGATGTGTGCAGTCGTATACACAAACTACAGAGGTTAATTTTGATAAAAGAGTTAGTAGTAATAGTGTTGAACCTATCCATGTTGAACATAAATTTCAGAAGTCAGGTGCAGATGGACTGAATCGCTCAGCATATATTGTCAATTCCTCTGAAAAACCTACAGAGACATTTGATATCGATAGCTTCTTGGATCAGTTGGGACCGCGGTATAAAGATTGGTCTGGTCGTGGCCCTATTCCTGTGGATGCTGACTTGCTTCCTGGTGTTGTTCCTGGTTACAAGACACCATTTAGACTACTTCCTTACATGGTTAAAAGTACCCTTCGGAATAAGGAAATGACGGCTCTGCGTAGACTTGCAAGGCAAACTGCTCCTCATTTTGCTCTAGGTATTTCAGTGAACTTATCTGAGTAGCTTTTCATCTACCGCATAGTATTCAATTTGTCAATTAATTTCCTTCTTTTCACACTTCATGCGTACCGTGTGGTTTAGGGAGAAACAGGGAACACCAAGGATTAGCTACTGCTATCGTTAAATTGTGGGAGAAAAGTTCTATTGCAAAGATTGCCATCAAGAGGGGGGTTCCAAATACATGCAATGACAGAATGGCAGAAGAAATCAGGGTAAAAGATCATGATAACTATTATCAGTAGTTTGCCTGTTTGCATTCCTGTCTCCACAGTGTTATGTATGTGTTGAATCAAATAAACATGGCATTGCTTGATAAGTAGCTATTTTGCTGCCTTAATTAGTTCTTTTGCTTAATTCACACTTTTTGAATCCTTGAAATGTCAAATTTCTGAGAAAGCTGAGAGTAACAATCTGACAAAGAACGCTTAAGAAATCCACTAATGGACTTTGCTTTCTTCTCCTCTGCACTTCCATACTAATTTACCTCTTCGCCTGCTTGTTCTTGTGACGTATTGAATGCCTTCTTTTCTTGATTCGATGCATGACTGATGGTTAACCTTGAAATATGATCATTGTATTAGTTTCTCTTGCACACTGCAGCCTATGCATGTTTTGAATCTGTGTAACGGAACACTTGCAGAAATTAACAGGAGGAGTGCTTCTATCGAGGAACAAGGAGTACATTGTCTTCTACAGGGGCAATGATTTCATAACACCTAAAGTAAGGCAAGTCTTGGTGGAGAAGCAAGAGCAAGCAATCACTTGGCAGGATGAGGAAGAATTGGCTCGGCTTAAAGCATCAGCCTCGATCAGTGTCAAACCCAAAGTATTTAAAAATCCCCCAGTTGCTGGCACTCTCGCGGAAACTAGAGAGGCAAAATCTCGATGGGGAGATTCCATTAATGCTGAGCTCAGGAAAAAGGAGAAGAATCACATGATTCTTACAAAACATACCTCTCTTTTGAGGAACTTGAAGAGAAAATTGATTTTGGTATGCTCTTCAAAATGCATCTCTAGAAACAAAAGTTTAGTATTTTAATTTCATTACTCATTTGTAAGTAGCATTTTAGCTACTTTTTCCTCCATTGCACAAAGATATCTTTGTGATTATTTGTGTAATATCTACTCCTGTGCAGGCAAAAACAAAGGTCATAAAAGCAGAAAAGGCCTTGGCTAAAGTTCAAGAATTTCTCTCTCCAGCAGAGCTTCCAACTGATTTGGAAACTGTTACAGATGAGGAACGCTTCTTACTTCGCAGAATTGGCCTGAAAATGAAGGCCTTTCTAATGCTTGGTACAACTGGCACTTCTCACTTAACAGTTGTGATATAAAATGCATGTGGTGTTTTATGACTTGTCTATATGCATTAAAATTTTCTCAGGAAGACGAGAAGTTTTTGATGGAACAGTACAGAACATGCACTTGCATTGGAAGCATCGAGAATTAGTCAAGGTTCTTGTAAAGGGGAAGAGCTTTCCACAAGTAAAACATATTGCAATATCTCTGGAAGCTGAAAGTGGAGGAGTGCTCATTTCAGTTGATAAGACGACAAAAGGATATGCAATCATTTTGTACCGGGGTAAGAACTACAAGACGCCCCAAATTTTGAAGCCTCGAAACCTATTGTCAAGGAGAAAAGCATTGGCACGGTCTATAGAGCTCCAAAGGCGGGAGGTAATTCAAGTGCAAAATCTGATTTTCTTTTTCCATTATTTTATTTTTTGAACTCTATGTAAGTTGTATATGTATTTAATCAATTACATGGTCTAAAATAATCTAGGGATTAAATCATCATATCTCAAATCTGCGAGACAAGATCTGGAAGCTGAAGTCTCAACTTGTAAGTCATTTATACACGAGTTCTCTATGACAGTATGACTTATATTTTCTTATAGTAGTAAACATTTCTTGATGATGTTCTCTTCCTATGTCATGACCATCAGGTACGAATGCAAGTTGCTGGGGAAAAACCAGATGCGGAGTTACTTCAAACAGTTGAGGCTGATTTGTCTAAAGATGACGATAAAATAGAG