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BaseInfo

ncRNA ID bra-miR395b-5p
Species Brassica rapa
Class miRNA
Genome position chrA7:18563029-18563122 [-]
Reference genome Brapa_1.1
Source miRBase
Length 21
Mature sequence(if miRNA) 62 - GUUCCUCUGAGCACUUCAUUG - 82
Stem-loop(if miRNA) AUGUU   UA         UG         U     A   C    AUUU
     UCC  GAGUUCCUC  AGCACUUCA UGGAG UAC AUUU    U
     |||  |||||||||  ||||||||| ||||| ||| ||||    C
     AGG  CUCAAGGGG  UUGUGAAGU ACCUU AUG UAAA    U
-----   UC         GU         C     -   -    ACUA
Stem-loop sequence AUGUUUCCUAGAGUUCCUCUGAGCACUUCAUUGGAGAUACCAUUUAUUUUCUAUCAAAAUGUAUUCCACUGAAGUGUUUGGGGGAACUCCUGGA

Reference

1 PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis";
Jiang J, Lv M, Liang Y, Ma Z, Cao J;
BMC Genomics. 15:146(2014).