Search result

BaseInfo

ncRNA ID	osa_circ_038947
Species	Oryza sativa
Class	circRNA
Genome position	9:11607436-11609520[-]
Reference genome	RGAPv7
Source	PlantcircBase
Method	SMALT and Segemehl
Type	exonic
Splice junction sequence	CTCTCAGAAGATCAAAAAGATTGCCTCTAGGCATGTACTCGTAAATAAGAGCTAAATGAGCCTTCTCCGAGCAGTAGCCAACCAAAGAAACTAGATTCTTCATTCCACGCCGTCCCATTTAAATTGGCTCGGGAAACATGGATCACCCATCCAATTCTTTTTTATCCCGTACTCAACTTTAATAGCCCATATAGCATCAA
Tissues	leaf and panicle
Exon boundary	Yes-No
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CTCTCAGAAGATCAAAAAGATTGCCTCTAGGCATGTACTCGTAAATAAGAGCTAAATGAGCCTTCTCCGAGCAGTAGCCAACCAAAGAAACTAGATTCTTGTGACGGACCTTTGTCAAGCTCTCAAGCTATGTAATGAGAAAGAAAACATGGCGTAAATCATATATATGATTTTGAGAGTTCAGAGTTGTATTCTAAGGTTTCTTAAACCTCCATATTTCAAAATTTAGGTACCTCGGCTAAAAACTCATTAAACCCGTGCGATGATTTTTCAGAACGGATCTTCACGGCAACTTCAGTATTGTCTTCTAAATAGCCATGGTACACGCATCCGAAGCCTCCTTCTCCAATGAACTGTTGGAAGTTATCAGTAAGCTTCTTCAGCTCATCGTAGGTGAAATGGCGATTTTCATTTTTTTGTAGACGATCCCAATGATATTTTTCACTTCCTGGGATAGAAACTTGTTGCATAAAAAACCAGTTAAATAGAATAATTGCCCGATGGAGTAAACATTAATTATCAATATACTTGAATACAGGTAACGTGAGAAGAGCACACATACTATTGGACTTTCCTTTCGCTCTCCAGATCAAATATGCAATTAAAAGTGAGACCACTACCAGCACAGGAGCTGCTATTGAGATAGCTAAGATAGCAGCTCTTTTTTTAGATCCGGGCAGGTTTGTTTTGTTGCAGACATCACCATTTGACCCATAACTGAAATTACAAAACAATGAGTTCAGAGCTTACTTTGTTGTAAAAGGAACCGTCACATGCCAAATGATCAAAGGAATATTGCAATTTCGATAAATATAGATTGTGAAACAATACAGATCGACAAGAGTACACGCACCTGAAAACGAGCGATCCTTCATTTAGTTTACACAGGGAGTCTGGAATTGGTCCATTCAATTGGTTGCCTGACAAATTTCTAGGGAAAGTGACATGAAGGTTAGAAGTTAAGTAATGTCCTGATCTGCAACAATCTACAACTACAGCAGGGATGAAGCCACAGGGGGTCCTGCCTTCCCCCCCCCCCCCCTCCCGGCGCTGCGCAGCCCAATGAAAATCAAGTTTTTTTCTTAATCTTTTAGAGTACTACATTTTATTAATATCCAAGTATCTGATAGTCATTCTTACATAATTTTTTTTACTGGATCATTCTTACATAATTTGGCGGCTAATATTTCAAGGGTACAATTTATTATGTTATAACGTCTCGGTCATGAACGTACTGAACCTCAATCCTATGGTATAATTTGCATCTCCACTTCAATTTCAAAAGTTTAAAAATATTAGTAATACTTTCAAGATAGATAGTTTTTCTCATTTTCCCAATGTATAGTTTTGTCTGGTTATTTGCCTGTCTATCTATCTCAGATGATGTTGTCACCATTTGTGATCTGTCTTCTCGATGAGTACACATATGCAGTATGATTACCTACTCATGATCTATATTTTGTATTATCATACGTTCTTTTATGTTGATACGTATGATATATTGCCTATGGGAATTCTGTAAATGATGCACATATTATTTTTAGTTAATTTTACGATCGTAATCACTTAGTCAAGTTGCCCCTCTCGTGCAGTGCTCAGATCTTGGCTAGCCACTGGATGTAAAGTACCAATCACTTGTGAAAAATACTCTGCTGTGGATCGAGTTTGTGTTTTAATTTCCAACAGTTGAATGGCAAATTGGTGATCCTCATTTATGTGATATGGATGTTCAAACATAAAAAAGCAGAGGCAATTTCAGACACTTACAGATACTCAAGTGCTGTGAGCAACGTGAAGTTACTAGATATCACCCCATGCAAGTTACTGTTGGAGAGATCGCTGCATAACAAAATTTTAAGAAATCCAACAGAAGGCAGAGGTAATATACAGAAGGCAGCTAATAATATATAATACTATATATGCAAGATCTTGCGAATAATACTCACATTGATATTATCCTAGGAATATTATCACTTGTGTTCCGACATTCCACGCCGTCCCATTTAAATTGGCTCGGGAAACATGGATCACCCATCCAATTCTTTTTTATCCCGTACTCAACTTTAATAGCCCATATAGCATCAA