ncRNA ID | novel_gma_miR1180 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:31721297-31721434 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGAAGGAGCCGUCUUAGAAAUGU - 24 |
Stem-loop(if miRNA) |
--  GA    GC            -   CGAAAAAAA          AAA              AUU   U   GU  AGGA  CGUCUUAGAAAU GUA         AAUAAAAAAA   UCAUUUCUAAGAUG   UUG C   ||  ||||  |||||||||||| |||         ||||||||||   ||||||||||||||   ||| C   UA  UCCU  GCAGAAUCUUUA CAU         UUAUUUUUUU   AGUAAAGAUUCUGU   AAC A AA  AG    UA            A   --AAAAAAA          GUC              --C   A |
Stem-loop sequence | GUGAAGGAGCCGUCUUAGAAAUGUACGAAAAAAAAAUAAAAAAAAAAUCAUUUCUAAGAUGAUUUUGUCCAACAACUGUCUUAGAAAUGACUGUUUUUUUAUUAAAAAAAUACAAUUUCUAAGACGAUUCCUGAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006587752.2 |
|
2.5 | PREDICTED: Glycine max ALBINO3-like protein 2, chloroplastic (LOC102661649), mRNA | ALBINO3-like protein 2, chloroplastic(LOC102661649) | coding protein | psRNATarget |