Search result

BaseInfo

ncRNA ID osa_circ_038901
Species Oryza sativa
Class circRNA
Genome position 9:10839626-10840970[+]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence GGACATGGGAATGGAGGTTGTTGGAACTGAGGCTGCACCAGCAGAGGTTAAAGTAACTGATGGAGAAGTGAACCTTTTCCAAGAGAATGAAAGTAAAGCAGGAGATGGGTTCGCTTCAAGAAGATTTAACTGCTGCCAATGCCAGAAAGGACAAGGCACATGAATCATTGGTCCAATTGAGACATGCACGAGATGCCTAT
Tissues leaf and panicle/root/shoot, root, seed
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence GGACATGGGAATGGAGGTTGTTGGAACTGAGGCTGCACCAGCAGAGGTTAAAGTAACTGATGGAGAAGTGAACCTTTTCCAAGAGAATGAAAGTAAAGCAACTGCCAAGGAACGTGAGGAGGCGGTTCTTTTTGGTTCAGATAACAGCACAGCTACAGCAAATGGAGCCGCAAATGGCGCTGATTTGGCACCCCCAAAGGATGCAGAGGAGGACTGGCCTGAAGCTAGGAAAACACATAGCTTCTTCTTTGTCAAGATCCGCTTACTTGAGGACCCTAAGCTGAAAATGAAGATTGATCAGGCAGAAAAGGACTTCCAGAAGAAGATTCAAGCTCGTTCTCAAATTTTTGAGGCTATAAAAGCCAAGAAGGTATGGTCCTAGTTCTTACAGTTCTAGTACATATAAATATGGTCAATCTTGTTTAAATTTTATCCTAAATCAGCAAGAAGTTATATTCCTTACAACTTGTTTAAAACGACTGTCATCTGCTATTGATGCTAGAGCCTAGAATATGTTGCCAATTTGAGCAGACTACGAAATTTTGGTGATATGTCTGATTTTGGAACTTAATCTGCAGAATGAGCGCTTCGGTATTATCTCAGAGCTGAAGCCATTGGCTGCTGAGAACAAGCAATACAACGAAGCCGTAAGTGAGAAGTTGAAGGCGATAGAACCTCTTAGAAACCGTTTAGGAAAGTTCCGCGATGAAAACAATGCTATCCGGGCACAGGGTGCAGGCATATGTTCTTCAATTGAAGAGCTTGAGAAATCGGTATGGCAGTACGGTTAACCTATGATAATTTATTTTTCTGTTCTTCAGTCCAATATTTGATTACATGTTTGTGCCTTCTCCATTGCTTTGTCCTATTAGATCAAGAGATTGAACGACCGCATATCTCATGAGAGCATACCCTTGGATGAGGAGAAGCGGTTGATCAAACAGATTAGAGAGCTTGAAAAGACCAGACCGAAAGTCATCTCCACTTCTGCTAACCGAGCTCAAATCCAAGATACAGTGGTCGAAAGAGACGCCATACAGGATCAGGTTAAAGTAAGTATATACAACTAAATATTTGTTTGTGCATTTATCTTCTTGAAAAAAAAATAGAATTAATAATGGCCAAACATTGTTTGCAACTGTTACTTCAGATCATCGGGGAGGGCATTGATGGAGTAAAGAAGGAGCGACAAGCAGTCAGGTCTAAAATTAAGGTCCTGGAGGATGAGCTAAAGGCTATTGACATGGAGATGGGTTCGCTTCAAGAAGATTTAACTGCTGCCAATGCCAGAAAGGACAAGGCACATGAATCATTGGTCCAATTGAGACATGCACGAGATGCCTAT