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BaseInfo

ncRNA ID novel_gma_miR1179
Species Glycine max
Class miRNA
Genome position Chr15:38033153-38033236 [-]
Reference genome Glycine_max_v2.0
Source SRR1451640
Length 21
Mature sequence(if miRNA) 1 - UAGUUAUGGUUUUAGGCUUAU - 21
Stem-loop(if miRNA) --                            ------C       G
  AAGCCUAAAAUCAUAACUAAAUUAAGCA       UAGAAUU C
  ||||||||||||||||||||||||||||       |||||||
  UUCGGAUUUUGGUAUUGAUUUAAUUCGU       AUCUUAA U
UA                            UUCGAUU       A
Stem-loop sequence AAGCCUAAAAUCAUAACUAAAUUAAGCACUAGAAUUGCUAAAUUCUAUUAGCUUUGCUUAAUUUAGUUAUGGUUUUAGGCUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549615.3
ncRNA:21   UAUUCGGAUUUUGGUAUUGAU   1
  |*||*|||||||||*||||||
targets:5   AAAACCCUAAAACCCUAACUA   25

2.5 PREDICTED: Glycine max uncharacterized LOC100806052 (LOC100806052), mRNA uncharacterized LOC100806052(LOC100806052) coding protein psRNATarget