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BaseInfo

ncRNA ID	novel_gma_miR1173
Species	Glycine max
Class	miRNA
Genome position	Chr13:8482178-8482264 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451640;SRR1451642;SRR1451644;SRR1451646;SRR1451609
Length	22
Mature sequence(if miRNA)	66 - UGGAAAUUGAAUUUGUGGAGCC - 87
Stem-loop(if miRNA)	--UG  AA            ----------   C       CAC    U     GA  UUGAAUUUGUGG          AGC AAAAUUU   UAAU A     ||  ||||||||||||          ||| |||||||   ||||     CU  AACUUAAACACC          UCG UUUUAAA   AUUA U UGAA  AG            CGACUUAGUA   A       -UU    G
Stem-loop sequence	UGGAAAUUGAAUUUGUGGAGCCAAAAUUUCACUAAUUAUGAUUAUUAAAUUUUAGCUAUGAUUCAGCCCACAAAUUCAAGAUCAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK286453.1	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   ||||||||||||||||||||*| targets:1203   GGCUCCACAAAUUCAAUUUCAA   1224 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-28-L19	NA	coding protein	psRNATarget
XM_014772928.1	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||*||||||||||||=|| targets:331   CCCUCCCCAAAUUCAAUUUUCA   352 Target Full Sequence	2.5	PREDICTED: Glycine max vesicle-associated protein 2-2-like (LOC100779920), transcript variant X4, mRNA	vesicle-associated protein 2-2-like(LOC100779920)	coding protein	psRNATarget
XM_006602990.2	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||||||||||||*||||* targets:114   CUCUCCACAAAUUCAAGUUCCU   135 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102667529 (LOC102667529), mRNA	uncharacterized LOC102667529(LOC102667529)	coding protein	psRNATarget
XM_014765947.1	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||||||||||||*||||* targets:184   CUCUCCACAAAUUCAAGUUCCU   205 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102661205 (LOC102661205), mRNA	uncharacterized LOC102661205(LOC102661205)	coding protein	psRNATarget
XM_014772931.1	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   *|=|||*|||||||*||||||| targets:197   AGUUCCCCAAAUUCCAUUUCCA   218 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100793037 (LOC100793037), transcript variant X4, mRNA	uncharacterized LOC100793037(LOC100793037)	coding protein	psRNATarget
XM_006605766.2	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   *|=|||*|||||||*||||||| targets:196   AGUUCCCCAAAUUCCAUUUCCA   217 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100793037 (LOC100793037), transcript variant X1, mRNA	uncharacterized LOC100793037(LOC100793037)	coding protein	psRNATarget
XM_006605767.2	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   *|=|||*|||||||*||||||| targets:196   AGUUCCCCAAAUUCCAUUUCCA   217 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100793037 (LOC100793037), transcript variant X3, mRNA	uncharacterized LOC100793037(LOC100793037)	coding protein	psRNATarget
XM_006605768.2	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   *|=|||*|||||||*||||||| targets:196   AGUUCCCCAAAUUCCAUUUCCA   217 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100793037 (LOC100793037), transcript variant X2, mRNA	uncharacterized LOC100793037(LOC100793037)	coding protein	psRNATarget
XM_006580338.2	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||||*|*||||||||||| targets:587   CACUCCACCAUUUCAAUUUCCA   608 Target Full Sequence	2.5	PREDICTED: Glycine max WUSCHEL-related homeobox 1-like (LOC100777274), transcript variant X3, mRNA	WUSCHEL-related homeobox 1-like(LOC100777274)	coding protein	psRNATarget
XM_006580337.2	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||||*|*||||||||||| targets:586   CACUCCACCAUUUCAAUUUCCA   607 Target Full Sequence	2.5	PREDICTED: Glycine max WUSCHEL-related homeobox 1-like (LOC100777274), transcript variant X2, mRNA	WUSCHEL-related homeobox 1-like(LOC100777274)	coding protein	psRNATarget
XM_003525141.3	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||||*|*||||||||||| targets:584   CACUCCACCAUUUCAAUUUCCA   605 Target Full Sequence	2.5	PREDICTED: Glycine max WUSCHEL-related homeobox 1-like (LOC100777274), transcript variant X1, mRNA	WUSCHEL-related homeobox 1-like(LOC100777274)	coding protein	psRNATarget
XM_003530910.3	ncRNA:22   CCGAGGUGUUUAAGUUAAAGGU   1   **||||||*|*||||||||||| targets:639   CACUCCACCAUUUCAAUUUCCA   660 Target Full Sequence	2.5	PREDICTED: Glycine max WUSCHEL-related homeobox 1-like (LOC100785161), mRNA	WUSCHEL-related homeobox 1-like(LOC100785161)	coding protein	psRNATarget