Search result

BaseInfo

ncRNA ID	novel_gma_miR1170
Species	Glycine max
Class	miRNA
Genome position	Chr13:32052562-32052634 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451640
Length	22
Mature sequence(if miRNA)	1 - ACUCGAUUAUGUAUCAUAUGAA - 22
Stem-loop(if miRNA)	--   C      -            AUUAAC  UU   UU   CAU UGAUAC UAAUCGAGUUUU      UC  UUU  U   ||| |||||| ||||||||||||      ||  |||   GUA ACUAUG AUUAGCUCAAAA      AG  AAA  U AA   U      U            ------  UU   UU
Stem-loop sequence	CAUCUGAUACUAAUCGAGUUUUAUUAACUCUUUUUUUUUUUAAAUUGAAAAACUCGAUUAUGUAUCAUAUGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT099305.1	ncRNA:22   AAGUAUACUAUGUAUUAGCUCA   1   ||||*|||||||||||||*||| targets:174   UUCACAUGAUACAUAAUCAAGU   195 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-26L20 unknown mRNA	NA	coding protein	psRNATarget
XM_006587298.2	ncRNA:22   AAGUAUACUAUGUAUUAGCUCA   1   ||*|*||||||||||||=|||| targets:2506   UUAACAUGAUACAUAAUUGAGU   2527 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100795947 (LOC100795947), transcript variant X2, mRNA	uncharacterized LOC100795947(LOC100795947)	coding protein	psRNATarget
XM_006587297.2	ncRNA:22   AAGUAUACUAUGUAUUAGCUCA   1   ||*|*||||||||||||=|||| targets:2509   UUAACAUGAUACAUAAUUGAGU   2530 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100795947 (LOC100795947), transcript variant X1, mRNA	uncharacterized LOC100795947(LOC100795947)	coding protein	psRNATarget