ncRNA ID | novel_gma_miR1169 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:9646613-9646767 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAAGAUGAGUCAAGAACAAGCU - 24 |
Stem-loop(if miRNA) |
--CC                   C          CG                U  UUCUCCAU   GC   CA  GAU     UGUUCUUGACUCAUCUUCU CUUGAAGUGG  UCUCCAAUCAUCUUUC UC        UCC  UGU  CU   C     ||||||||||||||||||| ||||||||||  |||||||||||||||| ||        |||  |||  ||     ACAAGAACUGAGUAGAAGA GAACUUCAUC  AGAGGUUAGUGGAAAG AG        AGG  ACG  GA   U UCGA                   A          AA                U  -UUACCUC   AA   AA  ACU |
Stem-loop sequence | CCUGUUCUUGACUCAUCUUCUCCUUGAAGUGGCGUCUCCAAUCAUCUUUCUUCUUCUCCAUUCCGCUGUCACUGAUCUUCAAGAAGCAAAGGACUCCAUUGAUGAAAGGUGAUUGGAGAAACUACUUCAAGAAGAAGAUGAGUCAAGAACAAGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK286453.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-28-L19 | NA | coding protein | psRNATarget |