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BaseInfo

ncRNA ID novel_gma_miR1169
Species Glycine max
Class miRNA
Genome position Chr20:9646613-9646767 [-]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 24
Mature sequence(if miRNA) 1 - AAGAAGAUGAGUCAAGAACAAGCU - 24
Stem-loop(if miRNA) --CC                   C          CG                U  UUCUCCAU   GC   CA  GAU
    UGUUCUUGACUCAUCUUCU CUUGAAGUGG  UCUCCAAUCAUCUUUC UC        UCC  UGU  CU   C
    ||||||||||||||||||| ||||||||||  |||||||||||||||| ||        |||  |||  ||
    ACAAGAACUGAGUAGAAGA GAACUUCAUC  AGAGGUUAGUGGAAAG AG        AGG  ACG  GA   U
UCGA                   A          AA                U  -UUACCUC   AA   AA  ACU
Stem-loop sequence CCUGUUCUUGACUCAUCUUCUCCUUGAAGUGGCGUCUCCAAUCAUCUUUCUUCUUCUCCAUUCCGCUGUCACUGAUCUUCAAGAAGCAAAGGACUCCAUUGAUGAAAGGUGAUUGGAGAAACUACUUCAAGAAGAAGAUGAGUCAAGAACAAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286453.1
ncRNA:24   UCGAACAAGAACUGAGUAGAAGAA   1
  |||||*||||*||||||||||||*
targets:1442   AGCUUCUUCUAGACUCAUCUUCUC   1465

3.0 Glycine max cDNA, clone: GMFL01-28-L19 NA coding protein psRNATarget