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BaseInfo

ncRNA ID	novel_gma_miR1164
Species	Glycine max
Class	miRNA
Genome position	Chr12:11576424-11576515 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451639
Length	24
Mature sequence(if miRNA)	69 - GAAAAACCGAUGUUAACUGUCAAC - 92
Stem-loop(if miRNA)	--UA                    G      A  A        AUC     ACAGUUAACAUCGGUUUUUU GAAAAA UC AUGUUAAU   G     |||||||||||||||||||| |||||| || ||||||||   A     UGUCAAUUGUAGCCAAAAAG UUUUUU AG UACAAUUG   G CAAC                    G      -  C        CAA
Stem-loop sequence	UAACAGUUAACAUCGGUUUUUUGGAAAAAAUCAAUGUUAAUAUCGAGAACGUUAACAUCGAUUUUUUGGAAAAACCGAUGUUAACUGUCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI410543.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:9   GUAAGUGACAUUUAACAUCGGUUUUUU   35 Target Full Sequence	2.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:50   GUAAGUGACAUUUAACAUCGGUUUUUU   76 Target Full Sequence	2.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:151   GUAAGUGACAUUUAACAUCGGUUUUUU   177 Target Full Sequence	2.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
HI410543.1	ncRNA:24   CAAC------UGUCAAUUGUAGCCAAAAAG   1   ||||------|||*|||||||||||||||= targets:107   GUUGUAAGUAACAUUUAACAUCGGUUUUUU   136 Target Full Sequence	2.0	Sequence 8668 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:9   GUAAGUGACAUUUAACAUCGGUUUUUU   35 Target Full Sequence	2.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:50   GUAAGUGACAUUUAACAUCGGUUUUUU   76 Target Full Sequence	2.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:151   GUAAGUGACAUUUAACAUCGGUUUUUU   177 Target Full Sequence	2.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242673.1	ncRNA:24   CAAC------UGUCAAUUGUAGCCAAAAAG   1   ||||------|||*|||||||||||||||= targets:107   GUUGUAAGUAACAUUUAACAUCGGUUUUUU   136 Target Full Sequence	2.0	Sequence 8668 from Patent EP2985353	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:9   GUAAGUGACAUUUAACAUCGGUUUUUU   35 Target Full Sequence	2.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:50   GUAAGUGACAUUUAACAUCGGUUUUUU   76 Target Full Sequence	2.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CA---ACUGUCAAUUGUAGCCAAAAAG   1   ||---|||||*|||||||||||||||= targets:151   GUAAGUGACAUUUAACAUCGGUUUUUU   177 Target Full Sequence	2.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
JB171004.1	ncRNA:24   CAAC------UGUCAAUUGUAGCCAAAAAG   1   ||||------|||*|||||||||||||||= targets:107   GUUGUAAGUAACAUUUAACAUCGGUUUUUU   136 Target Full Sequence	2.0	Sequence 8668 from Patent EP2559767	NA	coding protein	psRNATarget
XM_003554185.3	ncRNA:24   CAACUGUCAAUUGUAGCCAAAAAG   1   |||*|=|*||*||||||||||||| targets:1653   GUUUAUAAUUCACAUCGGUUUUUC   1676 Target Full Sequence	3.0	PREDICTED: Glycine max sugar transporter ERD6-like 7 (LOC100819822), mRNA	sugar transporter ERD6-like 7(LOC100819822)	coding protein	psRNATarget