Search result

BaseInfo

ncRNA ID osa_circ_038747
Species Oryza sativa
Class circRNA
Genome position 9:6436506-6437501[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence CTCAACCCATGATTTTCCTTCAGCCTCAAGCAATGCAGCATTACATGTCTTAAGCACTACTGAATCACCAGAGAACATAGAGGCTGCTTCTTCCCATCCTCTGCATAGGACGAGCTCAGGTATCCATCCCATCTGTTGTAGCTTGTTAGAAACACTGATTGCAGCAGCTCTCCCTGCTTTGCTTAGAGGTCTGTCATGAT
Tissues leaf and panicle/root/shoot, root
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTCAACCCATGATTTTCCTTCAGCCTCAAGCAATGCAGCATTACATGTCTTAAGCACTACTGAATCACCAGAGAACATAGAGGCTGCTTCTTCCCATCCTTTATTATGTCCCATACACCTGAATATTTATTCTACAAAAATGTCATGATCGGACTTGAAGAAAAAAAAAATCTGAGCATGAGATTCAAAGCATAGGATGATTGGAAACAAATTAGAAGACTTACATTACAGTTAGGATTTCATCACTTGAATATTGACAAATTGCCTTTTGCAAATGTTCAGCAGTTTGACCATCCATTGCTGCAATTGAATAGAAACTTGGGATAAAGTGAACGATTGCTTCAGACAATCCCTTAACATGGTCTTGCAAGATCTTAAGAGTTTCCTTTGTACGAGTTGCATCACTGTATTGAAGAAGGATAAAAAAAAATTAAGGTGGATGGCCTATTCTATTTATATGCATACCAGAAAAACAATTTATGTGATTTTAGGCATTTCAGAGACATAAGTTCAAATAATTGGATGGGCAAGATGATACTTATAATGAATAATAGAGAAGTATTCCAGGCATGTACATTCCACTGAAACAAGATATCACCAAAAAGAACTCGGTAGAGTATATATGATGAACCACTACACATCCAAGGCAATCATAACTCACGTGGCAATACCATATCAATTATGGCGACACAAGATCTACTCCTACCTGAAAAAAGAAAGAGCAAAGAAAGGGGGAGGTAGAGAAAAAGCTAATGTGAATCTGCACCCTGCTGACCGGAAAGAAGTTCCAGAAAAACACTCATATTGCATTAGCAGCCTTTCAAGCTTTTTTGTCCATTAGCAGCCTTCTACATAATCAATGTATACAGATTTTCTTACAAAAGCTAAGTTGTTACCTGCATAGGACGAGCTCAGGTATCCATCCCATCTGTTGTAGCTTGTTAGAAACACTGATTGCAGCAGCTCTCCCTGCTTTGCTTAGAGGTCTGTCATGAT