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BaseInfo

ncRNA ID novel_gma_miR1159
Species Glycine max
Class miRNA
Genome position Chr20:22692915-22693024 [-]
Reference genome Glycine_max_v2.0
Source SRR1294479;SRR1295521
Length 24
Mature sequence(if miRNA) 87 - ACGGUGAGAAUGCUCGGAAUUGGA - 110
Stem-loop(if miRNA) ---A  G    A   -       UU    UU   A C   U     AAU     GAUGA
    CG UGAG AUG CUCGGAA  GGAU  UGA C UGG GCUUA   UUCAC     U
    || |||| ||| |||||||  ||||  ||| | ||| |||||   |||||
    GU GUUU UAC GAGUCUU  UUUA  ACU G AUC UGAGU   AAGUG     C
UUUG  G    G   A       --    CU   A A   -     ---     ACAAC
Stem-loop sequence ACGGUGAGAAUGCUCGGAAUUGGAUUUUGAACCUGGUGCUUAAAUUUCACGAUGAUCCAACAGUGAAUGAGUCUAAGAUCAUCAUUUUUCUGAGACAUGUUUGGUGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602325.2
ncRNA:24   AGGUUAAGGCUCGUAAGAGUGGCA   1
  ||--|||||*|*||||||||||||
targets:489   UC--AUUCCAACCAUUCUCACCGU   510

2.5 PREDICTED: Glycine max uncharacterized LOC102663265 (LOC102663265), mRNA uncharacterized LOC102663265(LOC102663265) coding protein psRNATarget