ncRNA ID | novel_gma_miR1159 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:22692915-22693024 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294479;SRR1295521 |
Length | 24 |
Mature sequence(if miRNA) | 87 - ACGGUGAGAAUGCUCGGAAUUGGA - 110 |
Stem-loop(if miRNA) |
---A  G    A   -       UU    UU   A C   U     AAU     GAUGA     CG UGAG AUG CUCGGAA  GGAU  UGA C UGG GCUUA   UUCAC     U     || |||| ||| |||||||  ||||  ||| | ||| |||||   |||||     GU GUUU UAC GAGUCUU  UUUA  ACU G AUC UGAGU   AAGUG     C UUUG  G    G   A       --    CU   A A   -     ---     ACAAC |
Stem-loop sequence | ACGGUGAGAAUGCUCGGAAUUGGAUUUUGAACCUGGUGCUUAAAUUUCACGAUGAUCCAACAGUGAAUGAGUCUAAGAUCAUCAUUUUUCUGAGACAUGUUUGGUGGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602325.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102663265 (LOC102663265), mRNA | uncharacterized LOC102663265(LOC102663265) | coding protein | psRNATarget |