ncRNA ID |
osa_circ_038689 |
Species |
Oryza sativa |
Class |
circRNA |
Genome position |
9:5841477-5841720[-] |
Reference genome |
RGAPv7 |
Source |
PlantcircBase
|
Method |
find_circ/circseq_cup/NA |
Type |
exonic |
Splice junction sequence |
TGGTTTGGTCTTTTTGCCTTTAGCTCCTGATGAAGCTCCCTTTTTAGCTGTTGAAGATGATGGTGGTCCTTGTAAAGCCAACTGCTGTGAATGCATAACACCTCTTACGGCCCGAGGTGGTAGGGCTAGGCGCTAGATCATGCATAGGCTGAGCATTATTGGGTAACATTGCTTGAGGCCCTCCTGCTGATCTCCATTCC |
Tissues |
root/root/shoot, root |
Exon boundary |
Yes-Yes |
Splicing signals |
AC-CT |
circRNA sequence |
TGGTTTGGTCTTTTTGCCTTTAGCTCCTGATGAAGCTCCCTTTTTAGCTGTTGAAGATGATGGTGGTCCTTGTAAAGCCAACTGCTGTGAATGCATAACAGGAGGCGGTGCAGGCAGGGCAGGAAATGATTGCGATGTCTTTTGCCTCTTACGGCCCGAGGTGGTAGGGCTAGGCGCTAGATCATGCATAGGCTGAGCATTATTGGGTAACATTGCTTGAGGCCCTCCTGCTGATCTCCATTCC |
Genomic sequence |
TGGTTTGGTCTTTTTGCCTTTAGCTCCTGATGAAGCTCCCTTTTTAGCTGTTGAAGATGATGGTGGTCCTTGTAAAGCCAACTGCTGTGAATGCATAACAGGAGGCGGTGCAGGCAGGGCAGGAAATGATTGCGATGTCTTTTGCCTCTTACGGCCCGAGGTGGTAGGGCTAGGCGCTAGATCATGCATAGGCTGAGCATTATTGGGTAACATTGCTTGAGGCCCTCCTGCTGATCTCCATTCC |