Search result

BaseInfo

ncRNA ID novel_gma_miR1154
Species Glycine max
Class miRNA
Genome position Chr8:23586173-23586267 [-]
Reference genome Glycine_max_v2.0
Source SRR1451639;SRR1451621
Length 24
Mature sequence(if miRNA) 72 - AAUCUUGGAGCACUAAUGAACAAU - 95
Stem-loop(if miRNA) ---AAUCU            G    AUUACUUG      AAG    UGA
        UGGAGCACUAAU AACA        UUGGCA   UCUA   A
        |||||||||||| ||||        ||||||   ||||   U
        AUCUUGUGGUUG UUGU        AACUGU   AGAU   A
GGUAUAUU            A    --CAUCCG      -GG    UAU
Stem-loop sequence AAUCUUGGAGCACUAAUGAACAAUUACUUGUUGGCAAAGUCUAUGAAUAUAUUAGAGGUGUCAAGCCUACUGUUAGUUGGUGUUCUAUUAUAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771367.1
ncRNA:24   UAACAAGUAAUCACGAGGUUCUAA   1
  =*|||||*||=|||||||||||||
targets:920   GAUGUUCCUUGGUGCUCCAAGAUU   943

2.0 PREDICTED: Glycine max auxin-responsive protein IAA13-like (LOC100813788), transcript variant X3, mRNA auxin-responsive protein IAA13-like(LOC100813788) coding protein psRNATarget