Search result

BaseInfo

ncRNA ID osa_circ_038593
Species Oryza sativa
Class circRNA
Genome position 9:4350804-4352495[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ/NA
Type exonic
Splice junction sequence CTTTAGTAATTCATCTCTTCCTGAGCCGTACAGGACTTTAATTTTCCTTTTTGTTCTTTCTTGTAGAAGAGGCTTCACAACCTAGCCACAAATGAAAAAATAAATGAGTCTGGTCGCTATACCTGCTTGGAGTATCCTGTCAATCCAACCAGCAGCGTATCCCGAATAGTTCTGTATAAATCAGAAGGGACTATAGGTTT
Tissues leaf and panicle/root/root
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTTAGTAATTCATCTCTTCCTGAGCCGTACAGGACTTTAATTTTCCTTTTTGTTCTTTCTTGTAGAAGAGGCTTCACAACCTAGCCACAAATGAAAAAAAAAATGATGTGCTAAACTTCAAAACCTTCAAACGGAAGTTGGAATTAAGAAAATAATAGAACGTGTATGCAAATTGACTGCATGGTGTATATGTATACTGACCTTCCAACATGCTGAAAAAACATATGGAGCATTGACAATGAAATAGGTCTCTGTTTTCTCAGGATAGTTAAGGTCATCGATGGCTGTTATCGTAGATAACATCTGCATCATGAAGAAGTCGATAAGCATATTGAAAAGTTTATTTTCACTGAAAACTGAAAGCCTGGTATAGCATAAGGTCAGCATACAAAAACCTTGAAACCAAAAACATCACACATAAAGTTAAGCTATCAGTATAATGAATAAACCAATATTGTTAGCTTTCCATAATCTAAACAATGAAGTAGTTTGGCAGCAGCATAGAAGATACTATTAATCTGTGATCCACATCCAGTTGCAGAATAGATAACAAAATGAGGGAGATCAAATGCATTACTTTAATTAATCCATTACAAGCTGCTCTTAGGTATTAGGCAGATCAGAAAGCCAATTAACTCGATTCTAGGCATGTTCATGATTTATGACCCCTTGCACCACAGAGTCTCTTTTTATGATTTATGACACTTGAATTCAAATTTGAATTGACATCAAACATTTTACCACATACAAAATAAGCCCACTGTCAGTTATCTTGCATATCTGAGAGGTTACACCGGAAAGAGAGAAGATTTTAGCAAATGCGAAAGACAGCCTACCTTTATTTGGTTCAAGGCAGAAAGCTTCAGCCCCGTCATATCCATAACCTTTAGGCAAGTGTTAATCTGTTTCCCGAACATCTTAGAGGCTTTCGGCTAAAGAAGAGAAAAAATATACTTAATATCTGTTTATAACATTGAAATTATGAATCATCAATAGAAAAGGCTTACCAGTACAACACGATCTCGATATTCATTCATCTGTATGTGTGATTGCACATAATAGTGCACCTAGTACAAAAATGAAGTAATTTAGACAAAATATTTCCAAGAAAAAGATATATCATGCTATGTTTTGTATTAAACAGTTGCTAATTCCTAATCCTATAACTGAAGTTAGAAGTAATCAAATGCAATTTAGTTTATCATCTACCATAATGGTATCAGACTTTAGCTCAGTGAATCTGGCTTTGAACAAATACTACTATGCACATTATTTTAGATTTAACCCAGGTAGATTTGTTCAGACTCTAATCAATAAATACCTACCGATGCCTTGTCAAGGGTACTGAGCCCAACACCGAATGCATAGACAGGTTGTCCCTACAAAAAGGAGAGGAAATGAGACGAAGAACAGCAAAAAAGCCTTTACTCAACAAAGAGAAAGCAAACTGCTGTCAAATGAAACTATTGTTCAGCAATACAATGCCATCCAAAACCAGATAATTTTAGATAAAGAAGTGTGAGATTTTTTTTTGACTTAAGAAATGTGAGATTTGAACATAAGGCTCCATTAAAATTATGAAAAAATGAAATAAATGAGTCTGGTCGCTATACCTGCTTGGAGTATCCTGTCAATCCAACCAGCAGCGTATCCCGAATAGTTCTGTATAAATCAGAAGGGACTATAGGTTT