Search result

BaseInfo

ncRNA ID novel_gma_miR1147
Species Glycine max
Class miRNA
Genome position Chr7:12948554-12948747 [+]
Reference genome Glycine_max_v2.0
Source SRR1451639;SRR1451641;SRR1451654;SRR1451658;SRR1451663;SRR1451605;SRR1451607;SRR1451611
Length 22
Mature sequence(if miRNA) 1 - UGUAUGCAUGAUGAACCUUGAC - 22
Stem-loop(if miRNA) --         G      C    C    AU        A                U       C      A      -  U           C  U UA
  UGUAUGCAU AUGAAC UUGA AUCG  UUUCUAGU AAACUGAUGUUAAUGU AUAUAUU AUAUCG UUUUGU AG AAAACCGAUGU AA G  A
  ||||||||| |||||| |||| ||||  |||||||| |||||||||||||||| ||||||| |||||| |||||| || ||||||||||| || |
  ACAUACGUA UACUUG AACU UAGC  AAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAGC AAAACG UC UUUUGGCUACA UU C  U
UC         G      C    A    -C        C                U       U      C      A  -           A  - UA
Stem-loop sequence UGUAUGCAUGAUGAACCUUGACAUCGAUUUUCUAGUAAAACUGAUGUUAAUGUUAUAUAUUCAUAUCGAUUUUGUAGUAAAACCGAUGUCAAUGUAAUAUCUUAACAUCGGUUUUCUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAACCGAUAUCAACGUUCAUGAUGCAUACACU