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BaseInfo

ncRNA ID osa_circ_038554
Species Oryza sativa
Class circRNA
Genome position 9:3758543-3758829[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/find_circ
Type exonic
Splice junction sequence AGATTGATCAAGGATCGGTATAAGTGCCTGCAGAACCTTCGCAACATTGAATTTGATGTTTGGCACTCTGAAATTTAGAAAAATATTTGTTAATAAGGCCGACAAGTGATTTCGGCACCCATGACAGGGGCCAGCAATGAAATAGCTTGCAGGATGGTCATGCGGTAGAGATAATGCGGGTTGTTTATCTTCTCCAGCAC
Tissues leaf and panicle/root
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence AGATTGATCAAGGATCGGTATAAGTGCCTGCAGAACCTTCGCAACATTGAATTTGATGTTTGGCACTCTGAAATTTAGAAAAATATTTGTTAATAAGGCCTTGATCAGATGGGTAAACTATACATTTACAAATTACAAATTTTTCACCTGTCCTTTGAGGAATTAATCACAACAGGGAGCAGCTGTTGACAAGTGATTTCGGCACCCATGACAGGGGCCAGCAATGAAATAGCTTGCAGGATGGTCATGCGGTAGAGATAATGCGGGTTGTTTATCTTCTCCAGCAC