Search result

BaseInfo

ncRNA ID	novel_gma_miR1143
Species	Glycine max
Class	miRNA
Genome position	Chr1:11172581-11172625 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451639;SRR1451607;SRR1451609;SRR1451611
Length	22
Mature sequence(if miRNA)	1 - UAGUUAACAUCGGUUUUUUGGA - 22
Stem-loop(if miRNA)	--                  AU   CAAAAAACCGAUGUUAAC  C   ||||||||||||||||||  A   GUUUUUUGGCUACAAUUG  U AG                  AU
Stem-loop sequence	CAAAAAACCGAUGUUAACAUCAUUAGUUAACAUCGGUUUUUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006590830.2	ncRNA:22   AGGUUUUUUGGCUACAAUUGAU   1   ***|||||||=||||||||||* targets:1336   CGAAAAAAACUGAUGUUAACUU   1357 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein At2g16365-like (LOC100795495), transcript variant X2, mRNA	F-box protein At2g16365-like(LOC100795495)	coding protein	psRNATarget
XM_003538966.3	ncRNA:22   AGGUUUUUUGGCUACAAUUGAU   1   ***|||||||=||||||||||* targets:1395   CGAAAAAAACUGAUGUUAACUU   1416 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein At2g16365-like (LOC100795495), transcript variant X1, mRNA	F-box protein At2g16365-like(LOC100795495)	coding protein	psRNATarget
XM_003555202.3	ncRNA:22   AGGUUUUUUGGCUACAAUUGAU   1   |**||||||||||||||*|||* targets:779   UGGAAAAAACCGAUGUUUACUU   800 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC100790240), mRNA	probable serine/threonine-protein kinase At1g18390(LOC100790240)	coding protein	psRNATarget