ncRNA ID | novel_gma_miR1140 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:2549484-2549568 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451639;SRR835770 |
Length | 21 |
Mature sequence(if miRNA) | 65 - AAUUGAAAGUCCUAUCAUGCA - 85 |
Stem-loop(if miRNA) |
--         -                     A   --AA AU   AAUUGAAAG UCCUAUCAUGCAUUAAGUUUU AGU    C  A   ||||||||| ||||||||||||||||||||| |||    |   UUAACUUUC AGGAUAGUACGUAAUUCAAAA UCA    G  C AU         U                     C   CUAG AA |
Stem-loop sequence | AAUUGAAAGUCCUAUCAUGCAUUAAGUUUUAAGUAACAUACAAGGAUCACUCAAAACUUAAUGCAUGAUAGGAUCUUUCAAUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524901.3 |
|
2.5 | PREDICTED: Glycine max serine/threonine-protein phosphatase PP2A catalytic subunit (LOC100782279), mRNA | serine/threonine-protein phosphatase PP2A catalytic subunit(LOC100782279) | coding protein | psRNATarget |