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BaseInfo

ncRNA ID novel_gma_miR1140
Species Glycine max
Class miRNA
Genome position Chr3:2549484-2549568 [-]
Reference genome Glycine_max_v2.0
Source SRR1451639;SRR835770
Length 21
Mature sequence(if miRNA) 65 - AAUUGAAAGUCCUAUCAUGCA - 85
Stem-loop(if miRNA) --         -                     A   --AA AU
  AAUUGAAAG UCCUAUCAUGCAUUAAGUUUU AGU    C  A
  ||||||||| ||||||||||||||||||||| |||    |
  UUAACUUUC AGGAUAGUACGUAAUUCAAAA UCA    G  C
AU         U                     C   CUAG AA
Stem-loop sequence AAUUGAAAGUCCUAUCAUGCAUUAAGUUUUAAGUAACAUACAAGGAUCACUCAAAACUUAAUGCAUGAUAGGAUCUUUCAAUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524901.3
ncRNA:21   ACGUACUAUCCUGAAAGUUAA   1
  |*|||||*|*|||||||||||
targets:1620   UACAUGAAAUGACUUUCAAUU   1640

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase PP2A catalytic subunit (LOC100782279), mRNA serine/threonine-protein phosphatase PP2A catalytic subunit(LOC100782279) coding protein psRNATarget