ncRNA ID | novel_gma_miR1138 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:23233444-23233601 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451639 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAAUUUAUUAUGUGUCGUUAGUCU - 24 |
Stem-loop(if miRNA) |
-- A         G           UC   C        A         G    AG   GU  AAUUA       CACAU   C AUUUAUUAU UGUCGUUAGUC  UUU UGUUAAGU AUGACGUGG AGAC  AGU  CA     UCAUUGA     U   | ||||||||| |||||||||||  ||| |||||||| ||||||||| ||||  |||  ||     |||||||     A   G UAAAUGAUG ACAGCAAUCAG  AAA GCAAUUCA UACUGUACC UCUG  UCA  GU     AGUAACU     U AA C         G           GA   A        C         G    CU   UG  ---GC       UCCUC |
Stem-loop sequence | CAAUUUAUUAUGUGUCGUUAGUCUCUUUCUGUUAAGUAAUGACGUGGGAGACAGAGUGUCAAAUUAUCAUUGACACAUUAUCUCCUUCAAUGACGUGGUACUUCGUCUGCCAUGUCAUCACUUAACGAAAAAGGACUAACGACAGGUAGUAAAUCGAA |