| ncRNA ID | bra-miR168a-3p |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | chrA6:25084101-25084233 [+] |
| Reference genome | Brapa_1.1 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 98 - CCCGCCUUGUAUCAAGUGAAU - 118 |
| Stem-loop(if miRNA) |
G C U C U A --G G CC -- C UUACG CGG CUC GA UCGCUUGGUGCAGG CGGGA CUGAUU GCU ACA GCCA CGUGG U ||||| ||| ||| || |||||||||||||| ||||| |||||| ||| ||| |||| ||||| AGUGC GCC GAG CU AGUGAACUAUGUUC GCCCU GGCUAG CGA UGU CGGU GUACC U A U C A C A GGA G -U UG U |
| Stem-loop sequence | UUACGGCGGCCUCUGACUCGCUUGGUGCAGGUCGGGAACUGAUUGGCUGACACCGCCACGUGGCUUUCCAUGGUUGGCUUGUGAGCAGGGAUCGGAUCCCGCCUUGUAUCAAGUGAAUCCGAGUCCGACGUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009132409.2 |
|
2.5 | PREDICTED: Brassica rapa trihelix transcription factor GT-3a-like (LOC103855423), mRNA | trihelix transcription factor GT-3a-like(LOC103855423) | coding protein | psRNATarget |
| 1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |