Search result

BaseInfo

ncRNA ID osa_circ_038427
Species Oryza sativa
Class circRNA
Genome position 9:1222598-1223852[-]
Reference genome RGAPv7
Source PlantcircBase
Method SMALT and Segemehl/NA
Type exonic
Splice junction sequence CTTCCAAGTACTATCCACCTCAGGAAACATGCTTGTGTTTGTGCCAGTCAGTCCACTTCCTGAAAGAATGGATTTAAAATACCACCAATGTAAGAATACAAGAAGGTAGTACCTTCATCAACCGAGGTTGCAGGTGTAACGACATGGAGATTAGGCCTTTTGGTCATGAAGTCACCAACTGTGTAGACTCCGTTGTTGTG
Tissues leaf and panicle/shoot, root
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence CTTCCAAGTACTATCCACCTCAGGAAACATGCTTGTGTTTGTGCCAGTCAGTCCACTTCCTGAAAGAATGGATTTAAAATACCACCAATGTAAGAATACAAGGATTATGGCATTTACTACCCAACAGTATACTTTCAAAAAATAAGTTAAATAGCTCAAGTTAATCTTTGCAGCTTAGAGTTCCAGAAAAGTTGCAGTGTGGGCAAAGCTTTTGTTGCATTCAGAATTTCAGATCAAAGTTATGGTTGCTATGGTTTAAACAAGGTTTGGTTGTAGGTATGCAAAAGATTATATGGTCCAAGCCGCCACTACTTATGGTTCTTTCTAGTTGTGATCCTGCCTATCAGGCTATCAAGATATTGACAAATGACCACCATGTATGACTGCAAGCAGATGGTTAGATGGTAGTGCAATGGTGTGTTAATGACAAATACTAGGCTTATGCAGTTTAGAGGATGCAATATTGTACTAGTAATATGAATTTGTTGTAAGCAAGTGATTTGAAGGTCCAAGAAGGAATACCTGATATTGAGTCAAGTGCTAACAGATCATAATCTGAGACAACACCCACCTGCAGGTGGAAGTAAGATTGAGTGGCAGAATGAGAAATCAGATACAATTCAACCATAATGTCAATGTAATGTTTCTTAAGACACAACATAATAGAGGAGATCAAAAGGCCCGCATGTCATGGGGACAAGGACACCGTTTTATGAATCAGCACTACATTCTAGATGTGAGCATTCCAAGATCTCTAAATCCTTTAGGTAGAATCACCATACTAGTTCGAATTTAGCATGTAAAAAGGTATAAAGTTTGAAACCGTGTTTGAGAAAGAAAATATCCTAGAATCATGTTACTGAGATAACTATTTAGCAATAAATCATTTCCCCTTGAGAAAAGCCCAACGTTGTTGACTTGTAAGCATAACTGTTTTGAGAATAAAAATTGCAGAGAGTAAGTAGAAAAAGATTGAATAGAGTGAAGTTTTGATGGGCACTAACCAACTTTCCGGTGTCATCAACAACAGGGAAACCAGAGATCTTGTGTTGCACCAGCGTCTCGAGAGCTGTAAAAACGAACAGAATAATAAGTTGGCGATTTGGTTTAGCAGCAAGCATAGTTAGGACATACTTCATATTATAGAAGTAGAGAAGAAGGTAGTACCTTCATCAACCGAGGTTGCAGGTGTAACGACATGGAGATTAGGCCTTTTGGTCATGAAGTCACCAACTGTGTAGACTCCGTTGTTGTG