Search result

BaseInfo

ncRNA ID novel_gma_miR1131
Species Glycine max
Class miRNA
Genome position Chr19:11423152-11423347 [+]
Reference genome Glycine_max_v2.0
Source SRR1451639;SRR1451641;SRR1451658;SRR1451607;SRR1451609
Length 22
Mature sequence(if miRNA) 1 - UGUAUGCAUGAUGAACCUUGAC - 22
Stem-loop(if miRNA) --         G      C             C      A                U       C     U       AUU                 
  UGUAUGCAU AUGAAC UUGACAUCGGUUU UCUAGU AAAUCGAUGUUAAUGU AUAUAUU ACAUU GUUUUGU   AAAACCGAUGUUAAUGUA
  ||||||||| |||||| ||||||||||||| |||||| |||||||||||||||| ||||||| ||||| |||||||   |||||||||||||||||A
  ACAUACGUA UACUUG AACUGUAGCCAAA AGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAG CAAAACG   UUUUGGCUACAAUUAUAU
UC         G      C             -      C                U       U     C       AUC                 
Stem-loop sequence UGUAUGCAUGAUGAACCUUGACAUCGGUUUCUCUAGUAAAAUCGAUGUUAAUGUUAUAUAUUCACAUUUGUUUUGUAUUAAAACCGAUGUUAAUGUAAUAUAUUAACAUCGGUUUUCUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAAACCGAUGUCAACGUUCAUGAUGCAUACACU