Search result

BaseInfo

ncRNA ID osa_circ_038416
Species Oryza sativa
Class circRNA
Genome position 9:1164493-1165448[+]
Reference genome RGAPv7
Source PlantcircBase
Method NA
Type exonic
Splice junction sequence TTGAGGAAAGAGGGGCGGCGAAATGAGTATGAACGCCACAAACTTCAAGCACTTAATCAGCGGCAGAAGTTGGTAAGCTTCTTATGTAGAATTGTATTTCAAAGGCGTGCTGCACTTGGTGAGGAGCTTGCCATTTTAAAACAAGAAGATGTCATGTCTGGTGCAGCTAGTCCGCCCAGAGGGAAGAATGGAAACTCTAG
Tissues root
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence NA
Genomic sequence TTGAGGAAAGAGGGGCGGCGAAATGAGTATGAACGCCACAAACTTCAAGCACTTAATCAGCGGCAGAAGTTGGTAAGCTTCTTATGTAGAATTGTATTTCAAAGAAAAGAAAGTGTCAATGTGAAAGTTTGGAAAAATTATAAGTTTATTGTAGGCATTATCCAAACTATCATTATTTGGACTATCTTAAAATACTAAGCTTCACTTTATGTGTAACTAGCTGCCCTGACATAGTTTTCGTCAAAGTTCATATCTTACTTAGCTATATAATTACGTGTAAGTTTTTCCCTCATATTATCATGTCTATTTATAAAATATTAAATATCAAAGTTTTGCATCTTTATGCAGGTTTTGCAGAGGAAGACTGAAGAAGCTGCGATGGCTACCAAAAGGCTGAAAGAGTTACTAGAGGCTCGGAAATCATCAGGACGTGACAACTCAGGTATCTCTCTCCGCATTGCGACCATTTTTCGCATTATAATTAATACTCCCAATCTAACAGCTCTTCCTTCTTTTTCTTTTTTTTTTTTTTTGCTTTCTTCCAAACACATCAGGCATGAATGGTACTTCTCCTGGCTCTCATGTAAGTTATTTTCCATACTTAAAGAAAAAGATCAGTTGCTTATTTGGAAATATCCTTGAGAATACTTTTTTTTGTAATGCAGATGACTGAGAAATCATTGCAAAAATGGCTAGAGCAAGATTTGGAAGTCATGGTGCATGTTCATGAAGTTCGAAACGAATATGAAAAGCAAAGTCAATTGTATGTGATTCATTTTATTTCCTTCCCAAATGTAAATTATAGAGATCATTCCTCATGTAATGCATGATTATGATGACTAATTTAAATGGTTTTAAAGGCGTGCTGCACTTGGTGAGGAGCTTGCCATTTTAAAACAAGAAGATGTCATGTCTGGTGCAGCTAGTCCGCCCAGAGGGAAGAATGGAAACTCTAG