Search result

BaseInfo

ncRNA ID osa_circ_038404
Species Oryza sativa
Class circRNA
Genome position 9:1160334-1160819[+]
Reference genome RGAPv7
Source PlantcircBase
Method find_circ/circseq_cup/NA
Type exonic
Splice junction sequence ACTGGGTCAGGGAAGACCTACACCATGGGGACGGCCTGCAAGGAGGGCTCACACATTGGGATTATCCCGCGTGCCATGGCCACGCTGTTCGACAAGATCGCCGAAGTGCATGTCACTACCCAGAAAGAAATGACGGCATGCCTTGAGCAAGGATCTCTGAGTCGTGCAACTGGAAGTACCAACATGAACAACCAATCAAG
Tissues root/root/shoot, root, seed
Exon boundary Yes-Yes
Splicing signals AG-GT
circRNA sequence ACTGGGTCAGGGAAGACCTACACCATGGGGACGGCCTGCAAGGAGGGCTCACACATTGGGATTATCCCGCGTGCCATGGCCACGCTGTTCGACAAGATCGACAAGCTCAAGAACCAAGTAGAGTTCCAGCTGCGCGTTTCGTTTATTGAGATTCTGAAAGAAGAGGTGAGGGATTTGCTTGATCCTGCTACTGCTGCTGTTGGCAAACTTGAGAATGGAAATGGACATGCAACCAAGTTGTCGGTTCCAGGTAAACCCCCTGTTCAGATCCGGGAGGCGTCGAACGGGGTCATAACGTTAGCAGGATCGACCGAAGTGCATGTCACTACCCAGAAAGAAATGACGGCATGCCTTGAGCAAGGATCTCTGAGTCGTGCAACTGGAAGTACCAACATGAACAACCAATCAAG
Genomic sequence ACTGGGTCAGGGAAGACCTACACCATGGGGACGGCCTGCAAGGAGGGCTCACACATTGGGATTATCCCGCGTGCCATGGCCACGCTGTTCGACAAGATCGACAAGCTCAAGAACCAAGTAGAGTTCCAGCTGCGCGTTTCGTTTATTGAGGTAAATTACCTGTTCCTGGATGAATCAAACATTTGTGGGATTGTAGAGAATCCAATTGTGCTCGTTCTCTTGATAGATTCTGAAAGAAGAGGTGAGGGATTTGCTTGATCCTGCTACTGCTGCTGTTGGCAAACTTGAGAATGGAAATGGACATGCAACCAAGTTGTCGGTTCCAGGTAAACCCCCTGTTCAGATCCGGGAGGCGTCGAACGGGGTCATAACGTTAGCAGGATCGACCGAAGTGCATGTCACTACCCAGAAAGAAATGACGGCATGCCTTGAGCAAGGATCTCTGAGTCGTGCAACTGGAAGTACCAACATGAACAACCAATCAAG