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BaseInfo

ncRNA ID novel_gma_miR1124
Species Glycine max
Class miRNA
Genome position Chr18:1714129-1714210 [+]
Reference genome Glycine_max_v2.0
Source SRR1294479
Length 21
Mature sequence(if miRNA) 1 - UGUGUGUGCUGUUCUUUAAUU - 21
Stem-loop(if miRNA) --   G            UA    U    -  G  UU    C
  UGU UGUGCUGUUCUU  AUUA AAUU UG AG  UUAC U
  ||| ||||||||||||  |||| |||| || ||  ||||
  ACA ACAUGACAAGAG  UAAU UUAA AU UC  AAUG U
AA   A            GC    C    U  G  -U    A
Stem-loop sequence UGUGUGUGCUGUUCUUUAAUUAUAAUUUGGAGUUUUACCUUAGUAAUCUGUAUAAUUCUAAUCGGAGAACAGUACAAACAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537622.2
ncRNA:21   UUAAUUUCUUGUCGUGUGUGU   1
  |=**|||||||||||||||||
targets:98   AGAGAAAGAACAGCACACACA   118

2.0 PREDICTED: Glycine max lysine histidine transporter-like 8 (LOC100819452), mRNA lysine histidine transporter-like 8(LOC100819452) coding protein psRNATarget