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BaseInfo

ncRNA ID novel_gma_miR1123
Species Glycine max
Class miRNA
Genome position Chr10:33123407-33123464 [+]
Reference genome Glycine_max_v2.0
Source SRR1451639
Length 22
Mature sequence(if miRNA) 37 - UAGUUAACAUCGGUUUUUUGGA - 58
Stem-loop(if miRNA) --U                 A       U
   GAAAAACCGAUGUUAAC AAUGAUG U
   ||||||||||||||||| |||||||
   UUUUUUGGCUACAAUUG UUACUAC A
AGG                 A       A
Stem-loop sequence UGAAAAACCGAUGUUAACAAAUGAUGUUAACAUCAUUAGUUAACAUCGGUUUUUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006590830.2
ncRNA:22   AGGUUUUUUGGCUACAAUUGAU   1
  ***|||||||=||||||||||*
targets:1336   CGAAAAAAACUGAUGUUAACUU   1357

2.5 PREDICTED: Glycine max F-box protein At2g16365-like (LOC100795495), transcript variant X2, mRNA F-box protein At2g16365-like(LOC100795495) coding protein psRNATarget
XM_003538966.3
ncRNA:22   AGGUUUUUUGGCUACAAUUGAU   1
  ***|||||||=||||||||||*
targets:1395   CGAAAAAAACUGAUGUUAACUU   1416

2.5 PREDICTED: Glycine max F-box protein At2g16365-like (LOC100795495), transcript variant X1, mRNA F-box protein At2g16365-like(LOC100795495) coding protein psRNATarget
XM_003555202.3
ncRNA:22   AGGUUUUUUGGCUACAAUUGAU   1
  |**||||||||||||||*|||*
targets:779   UGGAAAAAACCGAUGUUUACUU   800

2.5 PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC100790240), mRNA probable serine/threonine-protein kinase At1g18390(LOC100790240) coding protein psRNATarget