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BaseInfo

ncRNA ID novel_gma_miR1119
Species Glycine max
Class miRNA
Genome position Chr14:48221068-48221154 [-]
Reference genome Glycine_max_v2.0
Source SRR1451639
Length 24
Mature sequence(if miRNA) 1 - UUCCUGUACAAAUCUUUGAAAACA - 24
Stem-loop(if miRNA) --                         --  -U     AAAAACA
  UUUUUAAAGAUUUGUACAGGAAACA  GA  AAAAC       A
  |||||||||||||||||||||||||  ||  |||||
  AAAAGUUUCUAAACAUGUCCUUUGU  CU  UUUUG       A
AC                         GA  UU     GGAAAAA
Stem-loop sequence UUUUUAAAGAUUUGUACAGGAAACAGAUAAAACAAAAACAAAAAAAAGGGUUUUUUUCAGUGUUUCCUGUACAAAUCUUUGAAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776959.1
ncRNA:24   ACAAAAGUUUCUAAACAUGUCCUU   1
  **||||||||*|||||*|||||||
targets:1961   CCUUUUCAAAAAUUUGCACAGGAA   1984

2.5 PREDICTED: Glycine max probable serine/threonine-protein kinase drkD (LOC100813707), transcript variant X7, mRNA probable serine/threonine-protein kinase drkD(LOC100813707) coding protein psRNATarget
XM_006573698.2
ncRNA:24   ACAAAAGUUUCUAAACAUGUCCUU   1
  **||||||||*|||||*|||||||
targets:2067   CCUUUUCAAAAAUUUGCACAGGAA   2090

2.5 PREDICTED: Glycine max probable serine/threonine-protein kinase drkD (LOC100813707), transcript variant X1, mRNA probable serine/threonine-protein kinase drkD(LOC100813707) coding protein psRNATarget
XM_006589359.2
ncRNA:24   ACAAAAGUU-UCUAAACAUGUCCUU   1
  ||*|*||*|-|||||||||||||||
targets:297   UGGUCUCUAUAGAUUUGUACAGGAA   321

3.0 PREDICTED: Glycine max synaptotagmin-3-like (LOC100813029), transcript variant X2, mRNA synaptotagmin-3-like(LOC100813029) coding protein psRNATarget
XM_003536297.3
ncRNA:24   ACAAAAGUU-UCUAAACAUGUCCUU   1
  ||*|*||*|-|||||||||||||||
targets:900   UGGUCUCUAUAGAUUUGUACAGGAA   924

3.0 PREDICTED: Glycine max synaptotagmin-3-like (LOC100813029), transcript variant X1, mRNA synaptotagmin-3-like(LOC100813029) coding protein psRNATarget
XM_003555390.3
ncRNA:24   ACAAAAGUU-UCUAAACAUGUCCUU   1
  ||*|*||*|-|||||||||||||||
targets:887   UGGUCUCUAUAGAUUUGUACAGGAA   911

3.0 PREDICTED: Glycine max synaptotagmin-3-like (LOC100819310), mRNA synaptotagmin-3-like(LOC100819310) coding protein psRNATarget